RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TTC26A0AVF1 554 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TESPA1A2RU30 521 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 KLRG2A4D1S0 409 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 BTBD18B2RXH4 712 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L15C9J2P7 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L13C9JLJ4 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L11C9JVI0 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L18D6R9N7 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L22D6RA61 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L17D6RBQ6 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L19D6RCP7 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L20D6RJB6 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PGRMC1O00264 195 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 DNM1LO00429 736 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 ORC4O43929 436 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 ZBED4O75132 1171 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 COQ9O75208 318 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 NPTXRO95502 500 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 GYPCP04921 128 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CYP2C8P10632 490 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 EEF1GP26641 437 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PHBP35232 272 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PPP1R2P41236 205 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L24Q0WX57 530 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 NR5A1Q13285 461 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CYP4F22Q6NT55 531 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 USP17L6PQ6QN14 398 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 METTL16Q86W50 562 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TSEN2Q8NCE0 465 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PIGOQ8TEQ8 1089 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PRPF31Q8WWY3 499 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 LRRC37BQ96QE4 947 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 ZMYND12Q9H0C1 365 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 AS3MTQ9HBK9 375 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TCP11L1Q9NUJ3 509 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TUBA8Q9NY65 449 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 SLC4A7Q9Y6M7 1214 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 GRIN2DO15399 1336 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 ABCA3Q99758 1704 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CCL15-CCL14A0A0B4J2E2 113 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 SMCO2A6NFE2 343 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TRPA1O75762 1119 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 FTCDO95954 541 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CDC27P30260 824 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 MLH1P40692 756 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CCL15Q16663 113 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TMEM179Q6ZVK1 233 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 NOSTRINQ8IVI9 506 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CCDC110Q8TBZ0 833 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CCDC17Q96LX7 622 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PITPNM3Q9BZ71 974 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 OSBPL7Q9BZF2 842 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 RPAP3Q9H6T3 665 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PNMA2Q9UL42 364 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 MTUS1Q9ULD2 1270 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 KIAA0100Q14667 2235 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 ITIH6Q6UXX5 1313 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 ANKRD33BA6NCL7 494 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TMEM110-MUSTN1A8MSY1 372 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 E7ENQ6 273 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 NDUFB10O96000 172 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 CBX3Q13185 183 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 MPP3Q13368 585 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 SPDYE2Q495Y8 402 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 MTHFD1LQ6UB35 978 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 DPP9Q86TI2 863 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 SESTD1Q86VW0 696 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 LRRC34Q8IZ02 419 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PRCCQ92733 491 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 TUBB6Q9BUF5 446 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 DRC3Q9H069 523 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 SYNCQ9H7C4 482 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 EBF2Q9HAK2 575 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 MLXIPQ9HAP2 919 aa7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 RBM12Q9NTZ6 932 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 SUCLA2Q9P2R7 463 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-209ENST00000532540 ITGB4P16144 1822 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 EIF2AK2P19525 551 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 GUCY1A2P33402 732 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 GNAQP50148 359 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 KIF11P52732 1056 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 PLTPP55058 493 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 TAF1CQ15572 869 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 INAQ16352 499 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 LACTB2Q53H82 288 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 TCP11X2Q5H9J9 407 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 CDCA2Q69YH5 1023 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 PROCA1Q8NCQ7 364 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 NKX2-3Q8TAU0 364 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 GDAP1Q8TB36 358 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 MDM1Q8TC05 714 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 FERMT2Q96AC1 680 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 TUBGCP2Q9BSJ2 902 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 NDUFA13Q9P0J0 144 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 TOGARAM1Q9Y4F4 1720 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 AGPSO00116 658 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 SH2B2O14492 632 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 ADCY3O60266 1144 aa7.27□□□□□ -1.25
TGFBR3-209ENST00000532540 ZCCHC18P0CG32 403 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms