RNA–Protein interactions for RNA: ENST00000532056.5

KNL1-208, Transcript of kinetochore scaffold 1, human

TSL 3

Gene KNL1, Length 259 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-208	ENST00000532056	GIT2	Q14161	759 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	FSIP1	Q8NA03	581 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	DEPTOR	Q8TB45	409 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	SPIRE2	Q8WWL2	714 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	LRRC27	Q9C0I9	530 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	CHST12	Q9NRB3	414 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	RGS18	Q9NS28	235 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	C1orf112	Q9NSG2	853 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	AGPAT5	Q9NUQ2	364 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	KBTBD4	Q9NVX7	518 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	LARS	Q9P2J5	1176 aa	Known RBP	11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	KCNG1	Q9UIX4	513 aa		11.11	□□□□□ -0.63
KNL1-208	ENST00000532056	PHLPP2	Q6ZVD8	1323 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	ADGRA3	Q8IWK6	1321 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	DENND3	A2RUS2	1198 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	GOLGA6L4	A6NEF3	574 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	MYMK	A6NI61	221 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	SFI1	A8K8P3	1242 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	TSPAN1	O60635	241 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	TBCA	O75347	108 aa	Known RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	ERLIN2	O94905	339 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	FAM13A	O94988	1023 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	ZSCAN20	P17040	1043 aa	Predicted RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	NPTX2	P47972	431 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	EFNA5	P52803	228 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	SMAD3	P84022	425 aa	Known RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	AMHR2	Q16671	573 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	FAM187B	Q17R55	369 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	HABP4	Q5JVS0	413 aa	Known RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	PPP4R3CP	Q6ZMV5	832 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	HERC6	Q8IVU3	1022 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	MYOCD	Q8IZQ8	938 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	TMEM87A	Q8NBN3	555 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	DDX12P	Q92771	950 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	DNAJC19	Q96DA6	116 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	PRIMPOL	Q96LW4	560 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	ADAM2	Q99965	735 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	NTPCR	Q9BSD7	190 aa	Known RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	KIFC3	Q9BVG8	833 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	CCDC113	Q9H0I3	377 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	FZD8	Q9H461	694 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	GOLPH3L	Q9H4A5	285 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	PARVG	Q9HBI0	331 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	KMT5A	Q9NQR1	393 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	DACT1	Q9NYF0	836 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	ARHGAP28	Q9P2N2	729 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	USP25	Q9UHP3	1055 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	PIN4	Q9Y237	131 aa	Known RBP	11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	MYH11	P35749	1972 aa		11.1	□□□□□ -0.63
KNL1-208	ENST00000532056	CNTNAP2	Q9UHC6	1331 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	COL4A6	Q14031	1691 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	CCDC169	A6NNP5	214 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056		C9IYK1	514 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	ACTN4	O43707	911 aa	Known RBP	11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	GJB5	O95377	273 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	PRKCB	P05771	671 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	SLFN14	P0C7P3	912 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	SCP2	P22307	547 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	AXL	P30530	894 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	SYK	P43405	635 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	SARS	P49591	514 aa	Known RBP	11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	NDUFA8	P51970	172 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	SMTN	P53814	917 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	NCKAP1L	P55160	1127 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	AMPD3	Q01432	767 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	NCBP1	Q09161	790 aa	Known RBP	11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	MAPK6	Q16659	721 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	SLC24A5	Q71RS6	500 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	DYM	Q7RTS9	669 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	CEP57L1	Q8IYX8	460 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	KCNN1	Q92952	543 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	TOP1MT	Q969P6	601 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	CCDC51	Q96ER9	411 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	TRAIP	Q9BWF2	469 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	TRIM9	Q9C026	710 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	TMEM134	Q9H6X4	195 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	RNF216	Q9NWF9	866 aa	Predicted RBP	11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	SERTAD1	Q9UHV2	236 aa		11.09	□□□□□ -0.63
KNL1-208	ENST00000532056	GBF1	Q92538	1859 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	TRIOBP	Q9H2D6	2365 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	FRMD3	A2A2Y4	597 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	GRXCR1	A8MXD5	290 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056		H0YCG3	227 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	ACKR2	O00590	384 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	SLC16A4	O15374	487 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	TRAK2	O60296	914 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	STAG3L1	P0CL83	205 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	GAP43	P17677	238 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	HOXA11	P31270	313 aa	Predicted RBP	11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	RAB27A	P51159	221 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	FAM189B	P81408	668 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	RAB30	Q15771	203 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	LONRF3	Q496Y0	759 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	TPRN	Q4KMQ1	711 aa		11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	TWF2	Q6IBS0	349 aa	Known RBP	11.08	□□□□□ -0.64
KNL1-208	ENST00000532056	CNNM4	Q6P4Q7	775 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms