RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 PRKCEQ02156 737 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 PRR16Q569H4 304 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 OTOP3Q7RTS5 596 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 SKAP1Q86WV1 359 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 GLYCTKQ8IVS8 523 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 CRYGNQ8WXF5 182 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 ACSF2Q96CM8 615 aaPredicted RBP10.14□□□□□ -0.79
USF1-210ENST00000531842 MAP7D2Q96T17 732 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 FDXACB1Q9BRP7 624 aaPredicted RBP10.14□□□□□ -0.79
USF1-210ENST00000531842 RPP25Q9BUL9 199 aaKnown RBP10.14□□□□□ -0.79
USF1-210ENST00000531842 LSG1Q9H089 658 aaKnown RBP10.14□□□□□ -0.79
USF1-210ENST00000531842 SFXN1Q9H9B4 322 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 MAN1C1Q9NR34 630 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 FAM217BQ9NTX9 383 aaPredicted RBP10.14□□□□□ -0.79
USF1-210ENST00000531842 SAMM50Q9Y512 469 aa10.14□□□□□ -0.79
USF1-210ENST00000531842 NOTCH4Q99466 2003 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 ARID2Q68CP9 1835 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 CCDC195A0A1B0GUA6 201 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 POMCP01189 267 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 OATP04181 439 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 PSAPP07602 524 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 RNASELQ05823 741 aaKnown RBP10.13□□□□□ -0.79
USF1-210ENST00000531842 RSPO4Q2I0M5 234 aaPredicted RBP10.13□□□□□ -0.79
USF1-210ENST00000531842 LETM2Q2VYF4 491 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 MTERF2Q49AM1 385 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 NOMO2Q5JPE7 1267 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 CREB3L3Q68CJ9 461 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 TWF2Q6IBS0 349 aaKnown RBP10.13□□□□□ -0.79
USF1-210ENST00000531842 APOA5Q6Q788 366 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 AGMOQ6ZNB7 445 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 MAML2Q8IZL2 1156 aaPredicted RBP10.13□□□□□ -0.79
USF1-210ENST00000531842 SLC44A3Q8N4M1 653 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 RABGGTAQ92696 567 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 LENG9Q96B70 501 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 TMEM87BQ96K49 555 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 RTP3Q9BQQ7 232 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 BMP2KQ9NSY1 1161 aaPredicted RBP10.13□□□□□ -0.79
USF1-210ENST00000531842 RNF216Q9NWF9 866 aaPredicted RBP10.13□□□□□ -0.79
USF1-210ENST00000531842 DLGAP2Q9P1A6 1054 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 PIN4Q9Y237 131 aaKnown RBP10.13□□□□□ -0.79
USF1-210ENST00000531842 PCDHA10Q9Y5I2 948 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 IRAK3Q9Y616 596 aa10.13□□□□□ -0.79
USF1-210ENST00000531842 INPPL1O15357 1258 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 LILRB3O75022 631 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 FOSP01100 380 aaPredicted RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 CPA1P15085 419 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 RFX1P22670 979 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 LIFRP42702 1097 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 AK2P54819 239 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 RTN1Q16799 776 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 ZNF746Q6NUN9 644 aaPredicted RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 NIPA1Q7RTP0 329 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 ZNF579Q8NAF0 562 aaKnown RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 ZNF707Q96C28 371 aaPredicted RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 CEP89Q96ST8 783 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 MRPL9Q9BYD2 267 aaKnown RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 UNC45AQ9H3U1 944 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 FAM105AQ9NUU6 356 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 MARCH5Q9NX47 278 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 BARHL2Q9NY43 387 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 CACNG4Q9UBN1 327 aa10.12□□□□□ -0.79
USF1-210ENST00000531842 RALYQ9UKM9 306 aaKnown RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 NAP1L2Q9ULW6 460 aaPredicted RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 PRG3Q9Y2Y8 225 aaPredicted RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 MTF2Q9Y483 593 aaPredicted RBP10.12□□□□□ -0.79
USF1-210ENST00000531842 CLUHO75153 1309 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 RALGAPA1Q6GYQ0 2036 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 GOLGA8BA8MQT2 603 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 NRP1O14786 923 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 MSH4O15457 936 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 MAGEB2O15479 319 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 TEX28O15482 410 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 STBD1O95210 358 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 CYP3A4P08684 503 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 RPL17P18621 184 aaKnown RBP10.11□□□□□ -0.79
USF1-210ENST00000531842 CD72P21854 359 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 ADD1P35611 737 aaKnown RBP10.11□□□□□ -0.79
USF1-210ENST00000531842 POLGP54098 1239 aaPredicted RBP10.11□□□□□ -0.79
USF1-210ENST00000531842 NTHL1P78549 312 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 TBC1D8BQ0IIM8 1120 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 AP3B2Q13367 1082 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 TARBP2Q15633 366 aaKnown RBP10.11□□□□□ -0.79
USF1-210ENST00000531842 ADCK5Q3MIX3 580 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 PLA2G4FQ68DD2 849 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 PPP1R18Q6NYC8 613 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 GLB1LQ6UWU2 654 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 GET4Q7L5D6 327 aaPredicted RBP10.11□□□□□ -0.79
USF1-210ENST00000531842 SGMS1Q86VZ5 419 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 PALB2Q86YC2 1186 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 RHPN2Q8IUC4 686 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 SUMF1Q8NBK3 374 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 NLRP4Q96MN2 994 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 MINDY3Q9H8M7 445 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 DISC1Q9NRI5 854 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 SEPT9Q9UHD8 586 aaPredicted RBP10.11□□□□□ -0.79
USF1-210ENST00000531842 TCEAL9Q9UHQ7 104 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 VWA8A3KMH1 1905 aa10.11□□□□□ -0.79
USF1-210ENST00000531842 KLF18A0A0U1RQI7 1052 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms