RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TMEM184AQ6ZMB5 413 aa18.82■□□□□ 0.6
CPSF1-207ENST00000531727 RNF135Q8IUD6 432 aa18.82■□□□□ 0.6
CPSF1-207ENST00000531727 PSPC1Q8WXF1 523 aaKnown RBP18.82■□□□□ 0.6
CPSF1-207ENST00000531727 DYDC2Q96IM9 177 aa18.82■□□□□ 0.6
CPSF1-207ENST00000531727 FAM105AQ9NUU6 356 aa18.82■□□□□ 0.6
CPSF1-207ENST00000531727 RGL1Q9NZL6 768 aa18.82■□□□□ 0.6
CPSF1-207ENST00000531727 LOC730098B7Z3J9 87 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 GAS2O43903 313 aaKnown RBP18.81■□□□□ 0.6
CPSF1-207ENST00000531727 ALDH7A1P49419 539 aaKnown RBP18.81■□□□□ 0.6
CPSF1-207ENST00000531727 RAB27AP51159 221 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 GLB1LQ6UWU2 654 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 OTUD6AQ7L8S5 288 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 TMC7Q7Z402 723 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 NSUN7Q8NE18 718 aaKnown RBP18.81■□□□□ 0.6
CPSF1-207ENST00000531727 PRPF31Q8WWY3 499 aaKnown RBP18.81■□□□□ 0.6
CPSF1-207ENST00000531727 LPPQ93052 612 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 TMEM143Q96AN5 459 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 ZSWIM4Q9H7M6 989 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 AGPAT5Q9NUQ2 364 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 MUTYHQ9UIF7 546 aa18.81■□□□□ 0.6
CPSF1-207ENST00000531727 EIF5BO60841 1220 aaKnown RBP18.8■□□□□ 0.6
CPSF1-207ENST00000531727 ZNF623O75123 536 aa18.8■□□□□ 0.6
CPSF1-207ENST00000531727 LAMTOR4Q0VGL1 99 aa18.8■□□□□ 0.6
CPSF1-207ENST00000531727 SMC1AQ14683 1233 aaKnown RBP18.8■□□□□ 0.6
CPSF1-207ENST00000531727 LONRF3Q496Y0 759 aa18.8■□□□□ 0.6
CPSF1-207ENST00000531727 SRGAP1Q7Z6B7 1085 aa18.8■□□□□ 0.6
CPSF1-207ENST00000531727 TCP11Q8WWU5 503 aa18.8■□□□□ 0.6
CPSF1-207ENST00000531727 SUSD6Q92537 303 aa18.8■□□□□ 0.6
CPSF1-207ENST00000531727 PHF7Q9BWX1 381 aaPredicted RBP18.8■□□□□ 0.6
CPSF1-207ENST00000531727 CARNS1A5YM72 827 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 C2orf71A6NGG8 1288 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 MEIS3P2A8K0S8 358 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 NT5C1B-RDH14C9J2C7 533 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 SRGAP2CP0DJJ0 459 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 TECP42680 631 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 CYP4A11Q02928 519 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 CTTNQ14247 550 aaKnown RBP18.79■□□□□ 0.6
CPSF1-207ENST00000531727 CBX2Q14781 532 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-207ENST00000531727 EMC2Q15006 297 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 XKR9Q5GH70 373 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 NOMO2Q5JPE7 1267 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 ANKRD54Q6NXT1 300 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 LLGL2Q6P1M3 1020 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 MRPL43Q8N983 215 aaKnown RBP18.79■□□□□ 0.6
CPSF1-207ENST00000531727 PGBD4Q96DM1 585 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 TMEM169Q96HH4 297 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 S1PR5Q9H228 398 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 MINDY3Q9H8M7 445 aa18.79■□□□□ 0.6
CPSF1-207ENST00000531727 BMP2KQ9NSY1 1161 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-207ENST00000531727 BTBD18B2RXH4 712 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 ZBTB39O15060 712 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 ASAP2O43150 1006 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 JAK2O60674 1132 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 ZC3H11AO75152 810 aaKnown RBP eCLIP18.78■□□□□ 0.6
CPSF1-207ENST00000531727 OFD1O75665 1012 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 SLITRK3O94933 977 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 NEK4P51957 841 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 CALCRLQ16602 461 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 SYCE2Q6PIF2 218 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
CPSF1-207ENST00000531727 EIF2AK1Q9BQI3 630 aaKnown RBP18.78■□□□□ 0.6
CPSF1-207ENST00000531727 NRDE2Q9H7Z3 1164 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 TBC1D13Q9NVG8 400 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 PCDHA12Q9UN75 941 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 INPP5FQ9Y2H2 1132 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 PCDHB2Q9Y5E7 798 aa18.78■□□□□ 0.6
CPSF1-207ENST00000531727 LYPLA2O95372 231 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 HOXB8P17481 243 aaPredicted RBP18.77■□□□□ 0.6
CPSF1-207ENST00000531727 RNASELQ05823 741 aaKnown RBP18.77■□□□□ 0.6
CPSF1-207ENST00000531727 TRIM29Q14134 588 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 BMS1Q14692 1282 aaKnown RBP18.77■□□□□ 0.6
CPSF1-207ENST00000531727 MRPL10Q7Z7H8 261 aaKnown RBP18.77■□□□□ 0.6
CPSF1-207ENST00000531727 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 TMEM173Q86WV6 379 aaPredicted RBP18.77■□□□□ 0.6
CPSF1-207ENST00000531727 TPH2Q8IWU9 490 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 RNF149Q8NC42 400 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 EDAQ92838 391 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 CASP10Q92851 521 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 MTRQ99707 1265 aa18.77■□□□□ 0.6
CPSF1-207ENST00000531727 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
CPSF1-207ENST00000531727 NEMFO60524 1076 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 CLASP2O75122 1294 aaKnown RBP18.76■□□□□ 0.59
CPSF1-207ENST00000531727 CXCL14O95715 111 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 GALTP07902 379 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 HOXA11P31270 313 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-207ENST00000531727 FOSBP53539 338 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 UBXN11Q5T124 520 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 AGMOQ6ZNB7 445 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 DDX53Q86TM3 631 aaKnown RBP18.76■□□□□ 0.59
CPSF1-207ENST00000531727 URGCPQ8TCY9 931 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 IGSF21Q96ID5 467 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 RPGRIP1Q96KN7 1286 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 HSD17B14Q9BPX1 270 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 ZBP1Q9H171 429 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 XPNPEP1Q9NQW7 623 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 ANKEF1Q9NU02 776 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 HCFC2Q9Y5Z7 792 aa18.76■□□□□ 0.59
CPSF1-207ENST00000531727 CNTNAP2Q9UHC6 1331 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 WNT7AO00755 349 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 CA8P35219 290 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms