RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 PLA2G4BP0C869 781 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 THPOP40225 353 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 RFC5P40937 340 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 CLCN3P51790 818 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 LRRC63Q05C16 580 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 KCNJ12Q14500 433 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 MCM6Q14566 821 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 EMC2Q15006 297 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 PTPN14Q15678 1187 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 CENPPQ6IPU0 288 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 EFCAB12Q6NXP0 572 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 ARMCX5Q6P1M9 558 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 PADI6Q6TGC4 694 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 CNGA4Q8IV77 575 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 LRRC71Q8N4P6 559 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 DNAJB3Q8WWF6 145 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
NXF1-209ENST00000531474 DDX12PQ92771 950 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 WNT8BQ93098 351 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 MAP7D2Q96T17 732 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 TSG101Q99816 390 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 JPH2Q9BR39 696 aaPredicted RBP10.4□□□□□ -0.74
NXF1-209ENST00000531474 NOC4LQ9BVI4 516 aaKnown RBP10.4□□□□□ -0.74
NXF1-209ENST00000531474 NUP58Q9BVL2 599 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 PPP1R12CQ9BZL4 782 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 HIPK3Q9H422 1215 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 ATP6V0A4Q9HBG4 840 aa10.4□□□□□ -0.74
NXF1-209ENST00000531474 ZMYND8Q9ULU4 1186 aaPredicted RBP10.4□□□□□ -0.74
NXF1-209ENST00000531474 R3HCC1Q9Y3T6 440 aaKnown RBP10.4□□□□□ -0.74
NXF1-209ENST00000531474 SMIM35A0A1B0GVV1 85 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 A0A1W2PQC6 194 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 TRIM43BA6NCK2 446 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 MYMKA6NI61 221 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 KIAA0355O15063 1070 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 MAFO75444 373 aaPredicted RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 DGAT1O75907 488 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 CTSHP09668 335 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 RAG1P15918 1043 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 SYN1P17600 705 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 TMOD1P28289 359 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 RGS19P49795 217 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 DNM2P50570 870 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 COPB1P53618 953 aaKnown RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 TMEM62Q0P6H9 643 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 BFSP2Q13515 415 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 KRT31Q15323 416 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 TSR1Q2NL82 804 aaKnown RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 TTI2Q6NXR4 508 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 MAEAQ7L5Y9 396 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 RSPH3Q86UC2 560 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 GPBP1Q86WP2 473 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 EXOC8Q8IYI6 725 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 SMYD4Q8IYR2 804 aaPredicted RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 CCAR2Q8N163 923 aaKnown RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 CSGALNACT2Q8N6G5 542 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 CAGE1Q8TC20 777 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 LRRC15Q8TF66 581 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 TMEM143Q96AN5 459 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 TRIM43Q96BQ3 446 aaPredicted RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 CEP89Q96ST8 783 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 PPP1R16BQ96T49 567 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 RUSC1Q9BVN2 902 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 SRRTQ9BXP5 876 aaKnown RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 DHX33Q9H6R0 707 aaKnown RBP10.39□□□□□ -0.75
NXF1-209ENST00000531474 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 AKT3Q9Y243 479 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 GDAQ9Y2T3 454 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 NR2E3Q9Y5X4 410 aa10.39□□□□□ -0.75
NXF1-209ENST00000531474 UMODL1Q5DID0 1318 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 IGKV6-21A0A0C4DH24 114 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 GAS2O43903 313 aaKnown RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 GNA14O95837 355 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 VTNP04004 478 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 RPLP2P05387 115 aaKnown RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 KRT18P05783 430 aaKnown RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 CKBP12277 381 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 TNNT1P13805 278 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 IDEP14735 1019 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 CYP11B2P19099 503 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 CYP2C18P33260 490 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 PBX1P40424 430 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 MRPS6P82932 125 aaKnown RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 DRP2Q13474 957 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 TRIM71Q2Q1W2 868 aaKnown RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 FAM102BQ5T8I3 360 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 LRRC8DQ7L1W4 858 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 APTXQ7Z2E3 356 aaKnown RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 KIAA0319LQ8IZA0 1049 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 LINC01465Q8N7H1 131 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 SYT2Q8N9I0 419 aaPredicted RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 MCPH1Q8NEM0 835 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 TCP11Q8WWU5 503 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 SCLT1Q96NL6 688 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 BAG1Q99933 345 aaPredicted RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 POLR3FQ9H1D9 316 aaPredicted RBP10.38□□□□□ -0.75
NXF1-209ENST00000531474 XPNPEP1Q9NQW7 623 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 PANK4Q9NVE7 773 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 INTS13Q9NVM9 706 aa10.38□□□□□ -0.75
NXF1-209ENST00000531474 KCND2Q9NZV8 630 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms