RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PPFIA4O75335 1185 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 RECQL4O94761 1208 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 SERINC3Q13530 473 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 OLFML1Q6UWY5 402 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 ZSWIM2Q8NEG5 633 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 NAF1Q96HR8 494 aaKnown RBP6.92□□□□□ -1.3
PTPRK-220ENST00000531466 CPPED1Q9BRF8 314 aaPredicted RBP6.92□□□□□ -1.3
PTPRK-220ENST00000531466 SNTG2Q9NY99 539 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 EIF2B4Q9UI10 523 aaKnown RBP6.92□□□□□ -1.3
PTPRK-220ENST00000531466 SYNPO2Q9UMS6 1093 aa6.92□□□□□ -1.3
PTPRK-220ENST00000531466 COL4A3Q01955 1670 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 PTPDC1A2A3K4 754 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 KIAA0355O15063 1070 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 TRIM24O15164 1050 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 MTSS1O43312 755 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 LPXNO60711 386 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 APOL3O95236 402 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 GYPEP15421 78 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 C21orf58P58505 322 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 LRCH2Q5VUJ6 765 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 UIMC1Q96RL1 719 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 TANGO6Q9C0B7 1094 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 EPC1Q9H2F5 836 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 TOR3AQ9H497 397 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 MTG2Q9H4K7 406 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 SYNPO2LQ9H987 977 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 CYP4F11Q9HBI6 524 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 ING3Q9NXR8 418 aa6.91□□□□□ -1.3
PTPRK-220ENST00000531466 CENPVL1A0A0U1RR11 272 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 H7C1D1 291 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 CFBP00751 764 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 CYP17A1P05093 508 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 LAG3P18627 525 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 ATP2B1P20020 1258 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 ADCY2Q08462 1091 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 EPHA7Q15375 998 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 NAALADL2Q58DX5 795 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 STRIP1Q5VSL9 837 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 ZCCHC8Q6NZY4 707 aaKnown RBP6.9□□□□□ -1.3
PTPRK-220ENST00000531466 CPEB1Q9BZB8 566 aaKnown RBP6.9□□□□□ -1.3
PTPRK-220ENST00000531466 PITHD1Q9GZP4 211 aaPredicted RBP6.9□□□□□ -1.3
PTPRK-220ENST00000531466 KCNH6Q9H252 994 aa6.9□□□□□ -1.3
PTPRK-220ENST00000531466 ADARB2Q9NS39 739 aaKnown RBP6.9□□□□□ -1.3
PTPRK-220ENST00000531466 TNPO3Q9Y5L0 923 aaKnown RBP6.9□□□□□ -1.3
PTPRK-220ENST00000531466 A0A0A6YYJ9 748 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 AHRRA9YTQ3 701 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 HOXA3O43365 443 aaPredicted RBP6.89□□□□□ -1.31
PTPRK-220ENST00000531466 FAM189BP81408 668 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 ZNF174Q15697 407 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 ZKSCAN2Q63HK3 967 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 Q6YL49 198 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 NME9Q86XW9 330 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 NCOA5Q9HCD5 579 aaKnown RBP6.89□□□□□ -1.31
PTPRK-220ENST00000531466 ANKFY1Q9P2R3 1169 aa6.89□□□□□ -1.31
PTPRK-220ENST00000531466 A0A0A6YYK5 440 aaPredicted RBP6.88□□□□□ -1.31
PTPRK-220ENST00000531466 CCDC163A0A0D9SF12 145 aa6.88□□□□□ -1.31
PTPRK-220ENST00000531466 ZNF37AP17032 561 aaPredicted RBP6.88□□□□□ -1.31
PTPRK-220ENST00000531466 SLC9A1P19634 815 aa6.88□□□□□ -1.31
PTPRK-220ENST00000531466 GTF2F1P35269 517 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPRK-220ENST00000531466 ATXN1P54253 815 aaKnown RBP6.88□□□□□ -1.31
PTPRK-220ENST00000531466 ESRP1Q6NXG1 681 aaKnown RBP6.88□□□□□ -1.31
PTPRK-220ENST00000531466 SYCE2Q6PIF2 218 aa6.88□□□□□ -1.31
PTPRK-220ENST00000531466 UNQ6494/PRO21346Q6UXR6 183 aa6.88□□□□□ -1.31
PTPRK-220ENST00000531466 LRP10Q7Z4F1 713 aa6.88□□□□□ -1.31
PTPRK-220ENST00000531466 SOX7Q9BT81 388 aa6.88□□□□□ -1.31
PTPRK-220ENST00000531466 MYL10Q9BUA6 226 aa6.88□□□□□ -1.31
PTPRK-220ENST00000531466 OPHN1O60890 802 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 RAPGEF3O95398 923 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 GAAP10253 952 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 APOBEC3AP31941 199 aaPredicted RBP6.87□□□□□ -1.31
PTPRK-220ENST00000531466 ZEB1P37275 1124 aaPredicted RBP6.87□□□□□ -1.31
PTPRK-220ENST00000531466 CLK3P49761 638 aaKnown RBP6.87□□□□□ -1.31
PTPRK-220ENST00000531466 MAN2A1Q16706 1144 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 KANSL1Q7Z3B3 1105 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 C7orf31Q8N865 590 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 MYEOVQ96EZ4 313 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 NOL10Q9BSC4 688 aaKnown RBP6.87□□□□□ -1.31
PTPRK-220ENST00000531466 SLC46A2Q9BY10 475 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 OSBPL6Q9BZF3 934 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 ENKD1Q9H0I2 346 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 POFUT1Q9H488 388 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 SERHL2Q9H4I8 314 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 CABP5Q9NP86 173 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 PTCH2Q9Y6C5 1203 aa6.87□□□□□ -1.31
PTPRK-220ENST00000531466 B4E1Z4 1266 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 ALDH1A2O94788 518 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 PRPF6O94906 941 aaKnown RBP6.86□□□□□ -1.31
PTPRK-220ENST00000531466 FSBPO95073 299 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 IGFALSP35858 605 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 CASRP41180 1078 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 RANGAP1P46060 587 aaPredicted RBP6.86□□□□□ -1.31
PTPRK-220ENST00000531466 VPS72Q15906 364 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 TIGD7Q6NT04 549 aaPredicted RBP6.86□□□□□ -1.31
PTPRK-220ENST00000531466 JMYQ8N9B5 988 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 PIK3C3Q8NEB9 887 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 OR52N2Q8NGI0 321 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 OR5M3Q8NGP4 307 aa6.86□□□□□ -1.31
PTPRK-220ENST00000531466 SRPK1Q96SB4 655 aaKnown RBP6.86□□□□□ -1.31
PTPRK-220ENST00000531466 ELF4Q99607 663 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms