RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CCDC195A0A1B0GUA6 201 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 TMEM150BA6NC51 233 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 MEIS3P2A8K0S8 358 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 hCG_1984214I3L0E3 225 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 ZNF862O60290 1169 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 OFD1O75665 1012 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 CNPP09543 421 aaKnown RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 SPATA31D3P0C874 917 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 SFPQP23246 707 aaKnown RBP eCLIP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 GNA11P29992 359 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 FUT2Q10981 343 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 UGCGQ16739 394 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 LETM2Q2VYF4 491 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 SPATA31D4Q6ZUB0 917 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 DHX32Q7L7V1 743 aaKnown RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 ZNF280BQ86YH2 543 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 KSR1Q8IVT5 923 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 CCDC105Q8IYK2 499 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 REXO1Q8N1G1 1221 aaKnown RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 ZNF713Q8N859 430 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 CCDC12Q8WUD4 166 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 BCL7CQ8WUZ0 217 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 PGBD4Q96DM1 585 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 CCDC136Q96JN2 1154 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 NLRP4Q96MN2 994 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 TEKT3Q9BXF9 490 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 INO80BQ9C086 356 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 SFXN1Q9H9B4 322 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 PIDD1Q9HB75 910 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 MRPL17Q9NRX2 175 aaKnown RBP10.4□□□□□ -0.74
NEDD8-206ENST00000531430 FAM105AQ9NUU6 356 aa10.4□□□□□ -0.74
NEDD8-206ENST00000531430 EP300Q09472 2414 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-206ENST00000531430 MSH4O15457 936 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 POMCP01189 267 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 LMNAP02545 664 aaKnown RBP10.39□□□□□ -0.75
NEDD8-206ENST00000531430 DCNP07585 359 aaKnown RBP10.39□□□□□ -0.75
NEDD8-206ENST00000531430 OR1G1P47890 313 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 CDC42EP1Q00587 391 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
NEDD8-206ENST00000531430 PTPN14Q15678 1187 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 LRCH2Q5VUJ6 765 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 DGLUCYQ7Z3D6 616 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 MIER3Q7Z3K6 550 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 PALB2Q86YC2 1186 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 LINC01465Q8N7H1 131 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 SLKQ9H2G2 1235 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-206ENST00000531430 UNC45AQ9H3U1 944 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 IGSF9Q9P2J2 1179 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 DUSP12Q9UNI6 340 aa10.39□□□□□ -0.75
NEDD8-206ENST00000531430 PRG3Q9Y2Y8 225 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-206ENST00000531430 VPS13AQ96RL7 3174 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 CCDC196A0A1B0GTZ2 297 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 DDHD2O94830 711 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 SRGAP2CP0DJJ0 459 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 CPA1P15085 419 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 CLCN4P51793 760 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 JAK3P52333 1124 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 EXOSC10Q01780 885 aaKnown RBP10.38□□□□□ -0.75
NEDD8-206ENST00000531430 TAS1R1Q7RTX1 841 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 TEX2Q8IWB9 1127 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 SLC44A3Q8N4M1 653 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 BICD2Q8TD16 824 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 PHKBQ93100 1093 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 ZMYND12Q9H0C1 365 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 MAN1C1Q9NR34 630 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 FAM217BQ9NTX9 383 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-206ENST00000531430 PCDHB2Q9Y5E7 798 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 IRAK3Q9Y616 596 aa10.38□□□□□ -0.75
NEDD8-206ENST00000531430 KRBA1A5PL33 1030 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 CARNS1A5YM72 827 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 NRP1O14786 923 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 INPPL1O15357 1258 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 RFPL2O75678 378 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 URODP06132 367 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 SFNP31947 248 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 AFF1P51825 1210 aaKnown RBP10.37□□□□□ -0.75
NEDD8-206ENST00000531430 NLRP5P59047 1200 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 ADCK5Q3MIX3 580 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 XKR3Q5GH77 459 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 ELMSAN1Q6PJG2 1045 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 Q6ZUG5 572 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 DCLK2Q8N568 766 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 CRYGNQ8WXF5 182 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 SMG7Q92540 1137 aaKnown RBP10.37□□□□□ -0.75
NEDD8-206ENST00000531430 STAMQ92783 540 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 RMDN1Q96DB5 314 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 VN1R3Q9BXE9 311 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 SLC26A6Q9BXS9 759 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 TBC1D17Q9HA65 648 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 RSAD1Q9HA92 442 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 BMP2KQ9NSY1 1161 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-206ENST00000531430 KANSL3Q9P2N6 904 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 WNT16Q9UBV4 365 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 MYO15AQ9UKN7 3530 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 SIT1Q9Y3P8 196 aa10.37□□□□□ -0.75
NEDD8-206ENST00000531430 MED19A0JLT2 244 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-206ENST00000531430 PRPF3O43395 683 aaKnown RBP10.36□□□□□ -0.75
NEDD8-206ENST00000531430 GAS2O43903 313 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms