RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 ZNF558Q96NG5 402 aa20.01■□□□□ 0.79
PTPN11-204ENST00000531326 NAP1L4Q99733 375 aaKnown RBP20.01■□□□□ 0.79
PTPN11-204ENST00000531326 ENTPD7Q9NQZ7 604 aa20.01■□□□□ 0.79
PTPN11-204ENST00000531326 PUF60Q9UHX1 559 aaKnown RBP20.01■□□□□ 0.79
PTPN11-204ENST00000531326 TMEM221A6NGB7 291 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 M0R296 226 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 ZXDAP98168 799 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 ANKRD54Q6NXT1 300 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 ABI1Q8IZP0 508 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 NLRP7Q8WX94 980 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 SH2D3AQ9BRG2 576 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 NIFKQ9BYG3 293 aaKnown RBP20■□□□□ 0.79
PTPN11-204ENST00000531326 SPG21Q9NZD8 308 aa20■□□□□ 0.79
PTPN11-204ENST00000531326 ATP2B1P20020 1258 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 PPM1AP35813 382 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 TECP42680 631 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 TRAPPC10P48553 1259 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 RESTQ13127 1097 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 MTERF2Q49AM1 385 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 LLGL2Q6P1M3 1020 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 MIER3Q7Z3K6 550 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 FERMT3Q86UX7 667 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 SLC39A11Q8N1S5 342 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 RDM1Q8NG50 284 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 ETNPPLQ8TBG4 499 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 HELQQ8TDG4 1101 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 SCLT1Q96NL6 688 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 APOL5Q9BWW9 433 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 KCNMB3Q9NPA1 279 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 NGRNQ9NPE2 291 aaKnown RBP19.99■□□□□ 0.79
PTPN11-204ENST00000531326 TSHZ2Q9NRE2 1034 aa19.99■□□□□ 0.79
PTPN11-204ENST00000531326 SEPT9Q9UHD8 586 aaPredicted RBP19.99■□□□□ 0.79
PTPN11-204ENST00000531326 IGKV6-21A0A0C4DH24 114 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 EOMESO95936 686 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 MRE11P49959 708 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 NBR1Q14596 966 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 XKR3Q5GH77 459 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 TMC7Q7Z402 723 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 POTEDQ86YR6 584 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 CDH22Q9UJ99 828 aa19.98■□□□□ 0.79
PTPN11-204ENST00000531326 NOL7Q9UMY1 257 aaKnown RBP19.98■□□□□ 0.79
PTPN11-204ENST00000531326 KRT17Q04695 432 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 PKP1Q13835 747 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 TTC38Q5R3I4 469 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 IER5LQ5T953 404 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 BRAPQ7Z569 592 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 HAS1Q92839 578 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 PBXIP1Q96AQ6 731 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 DACT1Q9NYF0 836 aa19.97■□□□□ 0.79
PTPN11-204ENST00000531326 A0A087WZ62 844 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 NT5C1B-RDH14C9J2C7 533 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 SRGAP2BP0DMP2 458 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 ANP32AP39687 249 aaKnown RBP19.96■□□□□ 0.79
PTPN11-204ENST00000531326 ZNF174Q15697 407 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 MRPL43Q8N983 215 aaKnown RBP19.96■□□□□ 0.79
PTPN11-204ENST00000531326 PRSS33Q8NF86 280 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 FDXACB1Q9BRP7 624 aaPredicted RBP19.96■□□□□ 0.79
PTPN11-204ENST00000531326 GCOM2Q9BZD3 368 aaPredicted RBP19.96■□□□□ 0.79
PTPN11-204ENST00000531326 TMEM60Q9H2L4 133 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 PCDHB6Q9Y5E3 794 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 KMT2EQ8IZD2 1858 aa19.96■□□□□ 0.79
PTPN11-204ENST00000531326 C2orf71A6NGG8 1288 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 TBX3O15119 743 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 NEMFO60524 1076 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 PDIA4P13667 645 aaKnown RBP19.95■□□□□ 0.78
PTPN11-204ENST00000531326 HOXB8P17481 243 aaPredicted RBP19.95■□□□□ 0.78
PTPN11-204ENST00000531326 MCM7P33993 719 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 PHKA2P46019 1235 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 BCAR1P56945 870 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 ORC2Q13416 577 aaPredicted RBP19.95■□□□□ 0.78
PTPN11-204ENST00000531326 SMC1AQ14683 1233 aaKnown RBP19.95■□□□□ 0.78
PTPN11-204ENST00000531326 RILPL1Q5EBL4 403 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 ANO5Q75V66 913 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 TMEM173Q86WV6 379 aaPredicted RBP19.95■□□□□ 0.78
PTPN11-204ENST00000531326 LPPQ93052 612 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 ASIC4Q96FT7 647 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 FAM20AQ96MK3 541 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 MTMR9Q96QG7 549 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 TRAIPQ9BWF2 469 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 CHST12Q9NRB3 414 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 HCFC2Q9Y5Z7 792 aa19.95■□□□□ 0.78
PTPN11-204ENST00000531326 MEIS3P2A8K0S8 358 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 EML1O00423 815 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 MAFO75444 373 aaPredicted RBP19.94■□□□□ 0.78
PTPN11-204ENST00000531326 SP100P23497 879 aaPredicted RBP19.94■□□□□ 0.78
PTPN11-204ENST00000531326 CDC42EP1Q00587 391 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 SIGLEC14Q08ET2 396 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 LONRF3Q496Y0 759 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 RHPN2Q8IUC4 686 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 KSR1Q8IVT5 923 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 C4orf32Q8N8J7 132 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 CASP10Q92851 521 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 PHOX2BQ99453 314 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 MRPL9Q9BYD2 267 aaKnown RBP19.94■□□□□ 0.78
PTPN11-204ENST00000531326 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.94■□□□□ 0.78
PTPN11-204ENST00000531326 SUCLA2Q9P2R7 463 aaPredicted RBP19.94■□□□□ 0.78
PTPN11-204ENST00000531326 RBM19Q9Y4C8 960 aaKnown RBP19.94■□□□□ 0.78
PTPN11-204ENST00000531326 ZDBF2Q9HCK1 2354 aa19.94■□□□□ 0.78
PTPN11-204ENST00000531326 DDX11L8A8MPP1 907 aa19.93■□□□□ 0.78
PTPN11-204ENST00000531326 CLASP2O75122 1294 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms