RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CDKL5O76039 1030 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 CYP3A7P24462 503 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 MTMR3Q13615 1198 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 IER5LQ5T953 404 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 GALNT17Q6IS24 598 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 ANO5Q75V66 913 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 TMEM173Q86WV6 379 aaPredicted RBP17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 KSR1Q8IVT5 923 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 TDRD5Q8NAT2 981 aaKnown RBP17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 ZNF274Q96GC6 653 aaPredicted RBP17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 CEP170P1Q96L14 293 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 ZBP1Q9H171 429 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 ADAM7Q9H2U9 754 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 CYP26B1Q9NR63 512 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 TBC1D13Q9NVG8 400 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 COL4A3BPQ9Y5P4 624 aa17.72■□□□□ 0.43
CHMP4A-204ENST00000530996 WDFY4Q6ZS81 3184 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 IGKV6-21A0A0C4DH24 114 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 C2CD4DB7Z1M9 353 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 DKC1O60832 514 aaKnown RBP eCLIP17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 XBP1P17861 261 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 MTHFRP42898 656 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 QARSP47897 775 aaKnown RBP17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 VCPP55072 806 aaKnown RBP17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 NPEPPSP55786 919 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 NEK8Q86SG6 692 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 KREMEN2Q8NCW0 462 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 PGBD4Q96DM1 585 aa17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 DBR1Q9UK59 544 aaKnown RBP17.71■□□□□ 0.43
CHMP4A-204ENST00000530996 MEIS3P2A8K0S8 358 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 EML1O00423 815 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 CCNT1O60563 726 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 GCFC2P16383 781 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 NCAPH2Q6IBW4 605 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 DDX53Q86TM3 631 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 CABP7Q86V35 215 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 FAM177A1Q8N128 213 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 C12orf76Q8N812 135 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 PSPC1Q8WXF1 523 aaKnown RBP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 TMEM143Q96AN5 459 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 ASIC4Q96FT7 647 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 IGSF21Q96ID5 467 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 MBOAT7Q96N66 472 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 FAM193BQ96PV7 902 aaPredicted RBP17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 CEP89Q96ST8 783 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 PHOX2BQ99453 314 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 AGPAT5Q9NUQ2 364 aa17.7■□□□□ 0.42
CHMP4A-204ENST00000530996 ZNF318Q5VUA4 2279 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 TRIOO75962 3097 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 M0R2N6 131 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 ERLIN2O94905 339 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 STBD1O95210 358 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 SRGAP2CP0DJJ0 459 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 CTSAP10619 480 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 EPCAMP16422 314 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 RFC5P40937 340 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 SLC11A1P49279 550 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 PPP2R5CQ13362 524 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 GIT2Q14161 759 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 NPY5RQ15761 445 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 PIK3AP1Q6ZUJ8 805 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 BCL7CQ8WUZ0 217 aaPredicted RBP17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 FAM20AQ96MK3 541 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 CCDC43Q96MW1 224 aaKnown RBP17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 LXNQ9BS40 222 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 TRAIPQ9BWF2 469 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 NRDE2Q9H7Z3 1164 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 RSAD1Q9HA92 442 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 FAM86C1Q9NVL1 165 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 VAV3Q9UKW4 847 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 SORCS3Q9UPU3 1222 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 PCDHB2Q9Y5E7 798 aa17.69■□□□□ 0.42
CHMP4A-204ENST00000530996 PDGFBP01127 241 aaPredicted RBP17.68■□□□□ 0.42
CHMP4A-204ENST00000530996 P4HBP07237 508 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-204ENST00000530996 EMC2Q15006 297 aa17.68■□□□□ 0.42
CHMP4A-204ENST00000530996 KIAA1841Q6NSI8 718 aa17.68■□□□□ 0.42
CHMP4A-204ENST00000530996 EXOC8Q8IYI6 725 aa17.68■□□□□ 0.42
CHMP4A-204ENST00000530996 NAP1L4Q99733 375 aaKnown RBP17.68■□□□□ 0.42
CHMP4A-204ENST00000530996 EMILIN2Q9BXX0 1053 aa17.68■□□□□ 0.42
CHMP4A-204ENST00000530996 EPB41L2O43491 1005 aaKnown RBP17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 OFD1O75665 1012 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 ASGR2P07307 311 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 GALTP07902 379 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 YWHABP31946 246 aaKnown RBP17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 CYP4A11Q02928 519 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 LAMTOR4Q0VGL1 99 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 TCF15Q12870 199 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 PTPN14Q15678 1187 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 ATAT1Q5SQI0 421 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 TMC5Q6UXY8 1006 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 PPFIBP1Q86W92 1011 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 UBALD2Q8IYN6 164 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 RNF149Q8NC42 400 aa17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 PRPF31Q8WWY3 499 aaKnown RBP17.67■□□□□ 0.42
CHMP4A-204ENST00000530996 PHF20Q9BVI0 1012 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms