RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TMEM131LA2VDJ0 1609 aa9.71□□□□□ -0.85
CSDE1-213ENST00000530784 A0A0G2JNJ9 132 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 NPEPPSL1A6NEC2 478 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 GAS7O60861 476 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 SLC6A3Q01959 620 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 SEPT7Q16181 437 aaKnown RBP9.71□□□□□ -0.86
CSDE1-213ENST00000530784 TMEM200BQ69YZ2 307 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 GRAMD4Q6IC98 578 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 LARP4Q71RC2 724 aaKnown RBP eCLIP9.71□□□□□ -0.86
CSDE1-213ENST00000530784 E2F7Q96AV8 911 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 Q9UFV3 132 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 SPO11Q9Y5K1 396 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 ROCK1Q13464 1354 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 IQGAP3Q86VI3 1631 aa9.71□□□□□ -0.86
CSDE1-213ENST00000530784 PRLP01236 227 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 RGS3P49796 1198 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 GYS2P54840 703 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 NOLC1Q14978 699 aaKnown RBP eCLIP9.7□□□□□ -0.86
CSDE1-213ENST00000530784 ESRP1Q6NXG1 681 aaKnown RBP9.7□□□□□ -0.86
CSDE1-213ENST00000530784 AHI1Q8N157 1196 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 PPM1KQ8N3J5 372 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.7□□□□□ -0.86
CSDE1-213ENST00000530784 CHTF18Q8WVB6 975 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 MEGF9Q9H1U4 602 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 THG1LQ9NWX6 298 aaKnown RBP9.7□□□□□ -0.86
CSDE1-213ENST00000530784 TMA7Q9Y2S6 64 aaKnown RBP9.7□□□□□ -0.86
CSDE1-213ENST00000530784 E9PCH4 1651 aa9.7□□□□□ -0.86
CSDE1-213ENST00000530784 A0A087X0B3 334 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 UBA6A0AVT1 1052 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-213ENST00000530784 ROM1Q03395 351 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 EFEMP1Q12805 493 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 DIP2AQ14689 1571 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 EPHA7Q15375 998 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 SLFN13Q68D06 897 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 PRRT2Q7Z6L0 340 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-213ENST00000530784 MAML3Q96JK9 1138 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 SCYL1Q96KG9 808 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 KIAA1683Q9H0B3 1180 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 TOMM22Q9NS69 142 aa9.69□□□□□ -0.86
CSDE1-213ENST00000530784 RGS17Q9UGC6 210 aaPredicted RBP9.69□□□□□ -0.86
CSDE1-213ENST00000530784 GSG1L2A8MUP6 293 aa9.68□□□□□ -0.86
CSDE1-213ENST00000530784 GPR42O15529 346 aa9.68□□□□□ -0.86
CSDE1-213ENST00000530784 MYCLP1P12525 358 aaPredicted RBP9.68□□□□□ -0.86
CSDE1-213ENST00000530784 RNF151Q2KHN1 245 aa9.68□□□□□ -0.86
CSDE1-213ENST00000530784 TTC38Q5R3I4 469 aa9.68□□□□□ -0.86
CSDE1-213ENST00000530784 TRIM68Q6AZZ1 485 aa9.68□□□□□ -0.86
CSDE1-213ENST00000530784 LOXL4Q96JB6 756 aa9.68□□□□□ -0.86
CSDE1-213ENST00000530784 KRTAP4-7Q9BYR0 210 aa9.68□□□□□ -0.86
CSDE1-213ENST00000530784 ADAMTS13Q76LX8 1427 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 NCOA3Q9Y6Q9 1424 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 NUP155O75694 1391 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 STAT5BP51692 787 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 PCOLCEQ15113 449 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 ZNF827Q17R98 1081 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 ZMAT1Q5H9K5 638 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 SLFN12LQ6IEE8 588 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 SDE2Q6IQ49 451 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 FILIP1Q7Z7B0 1213 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 NME9Q86XW9 330 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 BCL6BQ8N143 479 aaPredicted RBP9.67□□□□□ -0.86
CSDE1-213ENST00000530784 SAMD11Q96NU1 681 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 LRRC37BQ96QE4 947 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 TUBGCP5Q96RT8 1024 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 LMF1Q96S06 567 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 SEC61A2Q9H9S3 476 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 MYO5BQ9ULV0 1848 aa9.67□□□□□ -0.86
CSDE1-213ENST00000530784 PIK3R4Q99570 1358 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 JCADQ9P266 1359 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 CHD2O14647 1828 aaKnown RBP9.66□□□□□ -0.86
CSDE1-213ENST00000530784 PHLPP1O60346 1717 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 PDE8AO60658 829 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 MAFO75444 373 aaPredicted RBP9.66□□□□□ -0.86
CSDE1-213ENST00000530784 SCNN1BP51168 640 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 TBR1Q16650 682 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 SPATS1Q496A3 300 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 CIR1Q86X95 450 aaPredicted RBP9.66□□□□□ -0.86
CSDE1-213ENST00000530784 EFHBQ8N7U6 833 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 SMC1BQ8NDV3 1235 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 RTF1Q92541 710 aaKnown RBP9.66□□□□□ -0.86
CSDE1-213ENST00000530784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSDE1-213ENST00000530784 SMPD4Q9NXE4 827 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 MAGEL2Q9UJ55 1249 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 TRPM2O94759 1503 aa9.66□□□□□ -0.86
CSDE1-213ENST00000530784 TGM5O43548 720 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 HSD3B2P26439 372 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 MRE11P49959 708 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 ADCY1Q08828 1119 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 PRAMEF9Q5VWM5 478 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 RTKN2Q8IZC4 609 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 LEO1Q8WVC0 666 aaPredicted RBP9.65□□□□□ -0.86
CSDE1-213ENST00000530784 NEIL1Q96FI4 390 aaPredicted RBP9.65□□□□□ -0.86
CSDE1-213ENST00000530784 GPR101Q96P66 508 aaPredicted RBP9.65□□□□□ -0.86
CSDE1-213ENST00000530784 GNRHR2Q96P88 292 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
CSDE1-213ENST00000530784 COL16A1Q07092 1604 aaPredicted RBP9.64□□□□□ -0.87
CSDE1-213ENST00000530784 MAGEA10P43363 369 aaPredicted RBP9.64□□□□□ -0.87
CSDE1-213ENST00000530784 MEOX1P50221 254 aa9.64□□□□□ -0.87
CSDE1-213ENST00000530784 KPNA1P52294 538 aaPredicted RBP9.64□□□□□ -0.87
CSDE1-213ENST00000530784 RAC3P60763 192 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms