RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 C4orf32Q8N8J7 132 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 PPFIBP2Q8ND30 876 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.18■□□□□ 0.02
PCF11-204ENST00000530660 CNOT7Q9UIV1 285 aaKnown RBP15.18■□□□□ 0.02
PCF11-204ENST00000530660 MEGF6O75095 1541 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 TAC1P20366 129 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
PCF11-204ENST00000530660 JAMLQ86YT9 394 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 RASGRP4Q8TDF6 673 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 TMEM60Q9H2L4 133 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 SLCO1B3Q9NPD5 702 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 GRHL1Q9NZI5 618 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 CEP72Q9P209 647 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 PASKQ96RG2 1323 aa15.18■□□□□ 0.02
PCF11-204ENST00000530660 VARSP26640 1264 aaKnown RBP15.17■□□□□ 0.02
PCF11-204ENST00000530660 RPL21P46778 160 aaKnown RBP15.17■□□□□ 0.02
PCF11-204ENST00000530660 CDK7P50613 346 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 PTK2Q05397 1052 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 FUT2Q10981 343 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 ACVR2BQ13705 512 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 NCCRP1Q6ZVX7 275 aaPredicted RBP15.17■□□□□ 0.02
PCF11-204ENST00000530660 TTLL11Q8NHH1 800 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 PCDH18Q9HCL0 1135 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 CNNM1Q9NRU3 951 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 TBK1Q9UHD2 729 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 PNPLA7Q6ZV29 1317 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 RGPD5Q99666 1765 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 MAFGO15525 162 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 PLCG1P19174 1290 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 RXRBP28702 533 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 GALK1P51570 392 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 PTENP60484 403 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 AP1B1Q10567 949 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 LCORLQ8N3X6 602 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 SMYD1Q8NB12 490 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 STKLD1Q8NE28 680 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 CADM1Q9BY67 442 aaKnown RBP15.17■□□□□ 0.02
PCF11-204ENST00000530660 INIPQ9NRY2 104 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 ARPP21Q9UBL0 812 aaPredicted RBP15.17■□□□□ 0.02
PCF11-204ENST00000530660 TNKSO95271 1327 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 KRT13P13646 458 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 PPP2R5CQ13362 524 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 MAP7Q14244 749 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 CFAP157Q5JU67 520 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 SH2D4BQ5SQS7 431 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 CENPPQ6IPU0 288 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 BTNL9Q6UXG8 535 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 DTHD1Q6ZMT9 781 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 MARK2Q7KZI7 788 aaKnown RBP15.17■□□□□ 0.02
PCF11-204ENST00000530660 SCUBE1Q8IWY4 988 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 WDR66Q8TBY9 1149 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 C18orf8Q96DM3 657 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 ZNF711Q9Y462 761 aa15.17■□□□□ 0.02
PCF11-204ENST00000530660 BOLA2-SMG1P6H3BVE0 249 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 PLCG2P16885 1265 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 RASSF2P50749 326 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 YARSP54577 528 aaKnown RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 HELBQ8NG08 1087 aaPredicted RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 TDRKHQ9Y2W6 561 aaKnown RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 SH3GLB1Q9Y371 365 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 PSMG1O95456 288 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 ALOX15P16050 662 aaPredicted RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 CDR2Q01850 454 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 DCAF12L1Q5VU92 463 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 AADACL2Q6P093 401 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 SATL1Q86VE3 508 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 TMTC2Q8N394 836 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 SH3TC2Q8TF17 1288 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 ARHGEF1Q92888 912 aaKnown RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 OXCT2Q9BYC2 517 aaPredicted RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 GREM2Q9H772 168 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 AIPL1Q9NZN9 384 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
PCF11-204ENST00000530660 WDR37Q9Y2I8 494 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 NUMBLQ9Y6R0 609 aa15.16■□□□□ 0.02
PCF11-204ENST00000530660 MINDY4BA8MYZ0 360 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 DDX3XO00571 662 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCF11-204ENST00000530660 MAPK13O15264 365 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 RNASEH1O60930 286 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 GRIA2P42262 883 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 ZRSR2Q15696 482 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 MFSD5Q6N075 450 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 ZNF571Q7Z3V5 609 aaPredicted RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 MAP7D3Q8IWC1 876 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 GLIS3Q8NEA6 775 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 SH3RF3Q8TEJ3 882 aaPredicted RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 HAUS1Q96CS2 278 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 TMEM109Q9BVC6 243 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 DDX18Q9NVP1 670 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 LARSQ9P2J5 1176 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 SNAP23O00161 211 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 PRPF3O43395 683 aaKnown RBP15.15■□□□□ 0.02
PCF11-204ENST00000530660 E2F6O75461 281 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 EYA4O95677 639 aa15.15■□□□□ 0.02
PCF11-204ENST00000530660 PTPN4P29074 926 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms