RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 IQCB1Q15051 598 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 BMT2Q1RMZ1 405 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 KIZQ2M2Z5 673 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SPATA1Q5VX52 437 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CENPPQ6IPU0 288 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TAF2Q6P1X5 1199 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CREBRFQ8IUR6 639 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ENOX1Q8TC92 643 aaKnown RBP9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 HVCN1Q96D96 273 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 BICD1Q96G01 975 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 FDXACB1Q9BRP7 624 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GCOM2Q9BZD3 368 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TRPV6Q9H1D0 765 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ST6GALNAC4Q9H4F1 302 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TMEM134Q9H6X4 195 aa9.35□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 INO80B-WBP1J3KQ70 363 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 M0QZ92 97 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PDXKO00764 312 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 IKBKBO14920 756 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 FGFR1OPO95684 399 aaKnown RBP9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 HOXC8P31273 242 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 THPOP40225 353 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GJA8P48165 433 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GPC3P51654 580 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ATN1P54259 1190 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PTENP60484 403 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 LRRC63Q05C16 580 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 POU5F1BQ06416 359 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 MAPK6Q16659 721 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ZNF410Q86VK4 478 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 CSGALNACT2Q8N6G5 542 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SLC43A3Q8NBI5 491 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GOLGA5Q8TBA6 731 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 MED15Q96RN5 788 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 STRA6Q9BX79 667 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 SEZ6LQ9BYH1 1024 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 INO80BQ9C086 356 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 GBP3Q9H0R5 595 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 IKZF4Q9H2S9 585 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 KCTD10Q9H3F6 313 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TRMT13Q9NUP7 481 aaKnown RBP9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 TYW1Q9NV66 732 aaKnown RBP9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 FANCLQ9NW38 375 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 ARHGAP28Q9P2N2 729 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 NFE2L3Q9Y4A8 694 aa9.34□□□□□ -0.91
NEDD8-MDP1-201ENST00000530579 PHLPP2Q6ZVD8 1323 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 ADGRA3Q8IWK6 1321 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 TULP1O00294 542 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CETN3O15182 167 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CLIC2O15247 247 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 TGFB1I1O43294 461 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 GPR32O75388 356 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CSDE1O75534 798 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 PPP1R37O75864 691 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 RPLP2P05387 115 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 PRKCBP05771 671 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 RPL13P26373 211 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 LIG4P49917 911 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CDK7P50613 346 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CRYBB1P53674 252 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 MRPS6P82932 125 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 FKBP3Q00688 224 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 NCBP1Q09161 790 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 PTK7Q13308 1070 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 ADAM9Q13443 819 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 NCAPHQ15003 741 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 UVSSAQ2YD98 709 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 HSP90AA4PQ58FG1 418 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CDCA2Q69YH5 1023 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 SLC39A5Q6ZMH5 540 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 PPP4R3CPQ6ZMV5 832 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 SRGAP1Q7Z6B7 1085 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 SERINC5Q86VE9 423 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 MAP4K3Q8IVH8 894 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 ZNF710Q8N1W2 664 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 ANKLE1Q8NAG6 615 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 NOC3LQ8WTT2 800 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 DUSP9Q99956 384 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 TCHPQ9BT92 498 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 MRPL4Q9BYD3 311 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CELF4Q9BZC1 486 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 ADAMTS10Q9H324 1103 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 GRPEL1Q9HAV7 217 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 CDHR5Q9HBB8 845 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 IFT122Q9HBG6 1241 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 SAMSN1Q9NSI8 373 aaKnown RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 PRMT7Q9NVM4 692 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 MAGEC2Q9UBF1 373 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 TRAF3IP3Q9Y228 551 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 USP20Q9Y2K6 914 aa9.33□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 FSD2A1L4K1 749 aa9.32□□□□□ -0.92
NEDD8-MDP1-201ENST00000530579 DCDC2CA8MYV0 355 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms