RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 FAM105AQ9NUU6 356 aa23.26■■□□□ 1.31
TSPAN4-219ENST00000530404 CCDC194A0A1B0GVG4 234 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 CXCL14O95715 111 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 WEE2P0C1S8 567 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 CDC42EP1Q00587 391 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 BMP8AQ7Z5Y6 402 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 VPS52Q8N1B4 723 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 OXER1Q8TDS5 423 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 BCL7CQ8WUZ0 217 aaPredicted RBP23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 ZBP1Q9H171 429 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 TBC1D13Q9NVG8 400 aa23.25■■□□□ 1.31
TSPAN4-219ENST00000530404 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 QARSP47897 775 aaKnown RBP23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 PPP2R5CQ13362 524 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 KANK3Q6NY19 840 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 NEK8Q86SG6 692 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 C12orf76Q8N812 135 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 TMEM143Q96AN5 459 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 PHOX2BQ99453 314 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 INO80BQ9C086 356 aaPredicted RBP23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 POMKQ9H5K3 350 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 IFT122Q9HBG6 1241 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 KCNMB3Q9NPA1 279 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 DNAJB4Q9UDY4 337 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 COL4A3BPQ9Y5P4 624 aa23.24■■□□□ 1.31
TSPAN4-219ENST00000530404 MTCL1Q9Y4B5 1905 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 B4GALT3O60512 393 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 CCNT1O60563 726 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 OFD1O75665 1012 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 HOXB8P17481 243 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 SIGLEC14Q08ET2 396 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 PTPN21Q16825 1174 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 NOMO2Q5JPE7 1267 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 EARS2Q5JPH6 523 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 RARS2Q5T160 578 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 PIK3AP1Q6ZUJ8 805 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 SUGP1Q8IWZ8 645 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 FEZF2Q8TBJ5 459 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 CEP170P1Q96L14 293 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 TRAIPQ9BWF2 469 aa23.23■■□□□ 1.31
TSPAN4-219ENST00000530404 FAM205CA6NFA0 338 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 GALTP07902 379 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 SRGAP2CP0DJJ0 459 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 RNASELQ05823 741 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 TPRNQ4KMQ1 711 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 NCAPH2Q6IBW4 605 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 GLB1LQ6UWU2 654 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 ZBTB33Q86T24 672 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 HAS1Q92839 578 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 ASIC4Q96FT7 647 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 IGSF21Q96ID5 467 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 MINDY3Q9H8M7 445 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 AGPAT5Q9NUQ2 364 aa23.22■■□□□ 1.31
TSPAN4-219ENST00000530404 C2CD4DB7Z1M9 353 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 P4HBP07237 508 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 SKIP12755 728 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 EPCAMP16422 314 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 SLC11A1P49279 550 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 AFF1P51825 1210 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 POLGP54098 1239 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 VCPP55072 806 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 CES5AQ6NT32 575 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 ZNF280BQ86YH2 543 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 FAM177A1Q8N128 213 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 FBXL6Q8N531 539 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 SLC7A3Q8WY07 619 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 FAM20AQ96MK3 541 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 JPH2Q9BR39 696 aaPredicted RBP23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 LXNQ9BS40 222 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 VN1R3Q9BXE9 311 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 ADAM7Q9H2U9 754 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 RGL1Q9NZL6 768 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 TPCN1Q9ULQ1 816 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 PCDHB2Q9Y5E7 798 aa23.21■■□□□ 1.31
TSPAN4-219ENST00000530404 STK36Q9NRP7 1315 aa23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 ZBTB39O15060 712 aa23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 RAB27AP51159 221 aa23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 CTTNQ14247 550 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 PPP4R3AQ6IN85 833 aa23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 AGMOQ6ZNB7 445 aa23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 TMEM87AQ8NBN3 555 aa23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 PRPF31Q8WWY3 499 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 DYDC2Q96IM9 177 aa23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 DHX33Q9H6R0 707 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-219ENST00000530404 MARCH6O60337 910 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 ZNF623O75123 536 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 CDKL5O76039 1030 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 DDHD2O94830 711 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 CTDNEP1O95476 244 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 PDGFBP01127 241 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 CTSAP10619 480 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 CYP4A11Q02928 519 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 BMS1Q14692 1282 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 DDX53Q86TM3 631 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 PSPC1Q8WXF1 523 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 SMOC2Q9H3U7 446 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 NR2E1Q9Y466 385 aa23.19■■□□□ 1.3
TSPAN4-219ENST00000530404 PFKFB2O60825 505 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms