RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 ZNF564Q8TBZ8 553 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 TRAIPQ9BWF2 469 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 FSD1LQ9BXM9 530 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 HPCAL4Q9UM19 191 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 WDR91A4D1P6 747 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 PPP1R12AO14974 1030 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 NSUN2Q08J23 767 aaKnown RBP eCLIP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 KIF19Q2TAC6 998 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 RHPN2Q8IUC4 686 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 PASD1Q8IV76 773 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 SP8Q8IXZ3 490 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 TTC39CQ8N584 583 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 ZBTB18Q99592 522 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 POLE3Q9NRF9 147 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 HACD3Q9P035 362 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 ORC4O43929 436 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 PSMC5P62195 406 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 NR1H3Q13133 447 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 HP1BP3Q5SSJ5 553 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 RNF219Q5W0B1 726 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 TMEM270Q6UE05 265 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 ISCA1Q9BUE6 129 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 FAM96AQ9H5X1 160 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 ABCF3Q9NUQ8 709 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 KLHL8Q9P2G9 620 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 AFF2P51816 1311 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 PNPLA7Q6ZV29 1317 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 POLR1AO95602 1720 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 POTECB2RU33 542 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 COPEO14579 308 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SNX2O60749 519 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 CSPG5O95196 566 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 LMNAP02545 664 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 CDC27P30260 824 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 GNA15P30679 374 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 NUDCD3Q8IVD9 361 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SAAL1Q96ER3 474 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 KIFC3Q9BVG8 833 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 RNF146Q9NTX7 359 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 KPNA7A9QM74 516 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 ATP1A3P13637 1013 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 QARSP47897 775 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 GCLMP48507 274 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 DEUP1Q05D60 604 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 KCNH2Q12809 1159 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 TFDP2Q14188 446 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SLFNL1Q499Z3 407 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 GRAMD4Q6IC98 578 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SWSAP1Q6NVH7 229 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP17L6PQ6QN14 398 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 EXT2Q93063 718 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 EIF2AK1Q9BQI3 630 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 TMEM60Q9H2L4 133 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 ACAD9Q9H845 621 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 TUFT1Q9NNX1 390 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 GABBR1Q9UBS5 961 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 ANO9A1A5B4 782 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 HNRNPCL2B2RXH8 293 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SLC26A4O43511 780 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 HNRNPCL1O60812 293 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 KRT37O76014 449 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 ACSL3O95573 720 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 GGPS1O95749 300 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SKIP12755 728 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 STAT3P40763 770 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 USP11P51784 963 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 NEK2P51955 445 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 TAP1Q03518 808 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SPARCL1Q14515 664 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 TMCO5AQ8N6Q1 288 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SCG3Q8WXD2 468 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SPATA33Q96N06 139 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 WNT8AQ9H1J5 351 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 UTP6Q9NYH9 597 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 COPG1Q9Y678 874 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 E9PCH4 1651 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 SLC16A3O15427 465 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 FDX1P10109 184 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 NOP14P78316 857 aaKnown RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 NAALADL2Q58DX5 795 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 LRRC31Q6UY01 552 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 ENOSF1Q7L5Y1 443 aa9.05□□□□□ -0.96
CTNND1-221ENST00000529873 FMR1NBQ8N0W7 255 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 N4BP2L2Q92802 583 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-221ENST00000529873 CENPKQ9BS16 269 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms