RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 TTC12Q9H892 705 aaPredicted RBP8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 UBN1Q9NPG3 1134 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 TLR9Q9NR96 1032 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 SH2B1Q9NRF2 756 aaPredicted RBP8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 CD207Q9UJ71 328 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 VAV3Q9UKW4 847 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 KIF3AQ9Y496 699 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 COL4A3BPQ9Y5P4 624 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 LAMA2P24043 3122 aaKnown RBP8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 COL4A6Q14031 1691 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 BRWD1Q9NSI6 2320 aa8.74□□□□□ -1.01
CCDC90B-212ENST00000529312 GPR37L1O60883 481 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 DGAT1O75907 488 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 SRGAP2CP0DJJ0 459 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 FGFR1P11362 822 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 LTBRP36941 435 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 TXKP42681 527 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 PHKA2P46019 1235 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 RBM25P49756 843 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 GATMP50440 423 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 NPEPPSP55786 919 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 RNASELQ05823 741 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 SMAD4Q13485 552 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 GNL2Q13823 731 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 CAMK1Q14012 370 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 SMAD2Q15796 467 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 TMEM31Q5JXX7 168 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 TMEM92Q6UXU6 159 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 TMC7Q7Z402 723 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 ADHFE1Q8IWW8 467 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 NSUN7Q8NE18 718 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 ERMNQ8TAM6 284 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 DYDC2Q96IM9 177 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 C8orf76Q96K31 380 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 ZNF668Q96K58 619 aaPredicted RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 NLRP4Q96MN2 994 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 FAM193BQ96PV7 902 aaPredicted RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 NACC1Q96RE7 527 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 MTRQ99707 1265 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 HSD17B14Q9BPX1 270 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 EIF2AK1Q9BQI3 630 aaKnown RBP8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 LXNQ9BS40 222 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 CWH43Q9H720 699 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 RGL1Q9NZL6 768 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 SIP14410 1827 aa8.73□□□□□ -1.01
CCDC90B-212ENST00000529312 PTPRSQ13332 1948 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 MBTPS2O43462 519 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 NEMFO60524 1076 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 NR1I2O75469 434 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 EYA4O95677 639 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 CXCL14O95715 111 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 IL9P15248 144 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 HOXB8P17481 243 aaPredicted RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 COL9A1P20849 921 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 DNAJB1P25685 340 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 NRIP1P48552 1158 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 TRAPPC10P48553 1259 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 LAMTOR4Q0VGL1 99 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 COASYQ13057 564 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 NR5A1Q13285 461 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 CTTNQ14247 550 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 TMEM184AQ6ZMB5 413 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 MRPL10Q7Z7H8 261 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 RBM23Q86U06 439 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 ZNF598Q86UK7 904 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 HACE1Q8IYU2 909 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 URGCPQ8TCY9 931 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 TNFRSF25Q93038 417 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 TMEM143Q96AN5 459 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 CCDC51Q96ER9 411 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 TMEM169Q96HH4 297 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 SH2D3AQ9BRG2 576 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 FOXP1Q9H334 677 aaPredicted RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 EPHX3Q9H6B9 360 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 UPF2Q9HAU5 1272 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 TUFT1Q9NNX1 390 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 ENTPD7Q9NQZ7 604 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 GJB4Q9NTQ9 266 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 FAM105AQ9NUU6 356 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 NOL7Q9UMY1 257 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 PIN4Q9Y237 131 aaKnown RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 CNTNAP2Q9UHC6 1331 aa8.72□□□□□ -1.01
CCDC90B-212ENST00000529312 FSCN2O14926 492 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 CSDE1O75534 798 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 ERLIN2O94905 339 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 ATP2B1P20020 1258 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 MUTP22033 750 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 FGFR4P22455 802 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 IRS1P35568 1242 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 PTENP60484 403 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 ERVFC1P60507 584 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 DRP2Q13474 957 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 PDIA5Q14554 519 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 SMC1AQ14683 1233 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 EMC2Q15006 297 aa8.71□□□□□ -1.02
CCDC90B-212ENST00000529312 DUSP6Q16828 381 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms