RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 KIF3AQ9Y496 699 aa13.44□□□□□ -0.26
COPB1-206ENST00000529210 FSD2A1L4K1 749 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 FSCN2O14926 492 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 FGF18O76093 207 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 KCNA5P22460 613 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 AXLP30530 894 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 HOXA11P31270 313 aaPredicted RBP13.43□□□□□ -0.26
COPB1-206ENST00000529210 ARL2P36404 184 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.265e-10■■■■■ 36.2
COPB1-206ENST00000529210 PTENP60484 403 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 TTC38Q5R3I4 469 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 CATSPER4Q7RTX7 472 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 MRPL10Q7Z7H8 261 aaKnown RBP13.43□□□□□ -0.26
COPB1-206ENST00000529210 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 ABI1Q8IZP0 508 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 TMX3Q96JJ7 454 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 MINDY3Q9H8M7 445 aa13.43□□□□□ -0.26
COPB1-206ENST00000529210 DAXXQ9UER7 740 aaPredicted RBP13.43□□□□□ -0.26
COPB1-206ENST00000529210 NOL7Q9UMY1 257 aaKnown RBP13.43□□□□□ -0.26
COPB1-206ENST00000529210 PIN4Q9Y237 131 aaKnown RBP13.43□□□□□ -0.26
COPB1-206ENST00000529210 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 LAD1O00515 517 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 IRS1P35568 1242 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 ADAM15Q13444 863 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 PDIA5Q14554 519 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 ZNF174Q15697 407 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
COPB1-206ENST00000529210 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 EFHBQ8N7U6 833 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 ERMNQ8TAM6 284 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 MRPS27Q92552 414 aaKnown RBP13.42□□□□□ -0.26
COPB1-206ENST00000529210 CCDC51Q96ER9 411 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 NACC1Q96RE7 527 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 CDCA3Q99618 268 aaPredicted RBP13.42□□□□□ -0.26
COPB1-206ENST00000529210 TLR9Q9NR96 1032 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 HCSTQ9UBK5 93 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
COPB1-206ENST00000529210 INPPL1O15357 1258 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 MED24O75448 989 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 CD2BP2O95400 341 aaKnown RBP13.41□□□□□ -0.26
COPB1-206ENST00000529210 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 ATP2B1P20020 1258 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 PRPHP41219 470 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 TECP42680 631 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 TOB1P50616 345 aaPredicted RBP13.41□□□□□ -0.26
COPB1-206ENST00000529210 GNL2Q13823 731 aaKnown RBP13.41□□□□□ -0.26
COPB1-206ENST00000529210 TFDP1Q14186 410 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 AMHR2Q16671 573 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 UBXN11Q5T124 520 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
COPB1-206ENST00000529210 HAUS3Q68CZ6 603 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 PTCRAQ6ISU1 281 aaPredicted RBP13.41□□□□□ -0.26
COPB1-206ENST00000529210 FAM178BQ8IXR5 827 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 SLC39A11Q8N1S5 342 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 IGSF22Q8N9C0 903 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 CNNM3Q8NE01 707 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 HELQQ8TDG4 1101 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 PIGOQ8TEQ8 1089 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 PGBD4Q96DM1 585 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 CLDND1Q9NY35 253 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 PRKAG3Q9UGI9 489 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 FAM50BQ9Y247 325 aa13.41□□□□□ -0.26
COPB1-206ENST00000529210 CNTNAP2Q9UHC6 1331 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 OFD1O75665 1012 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 EYA4O95677 639 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 NCLP19338 710 aaKnown RBP13.4□□□□□ -0.26
COPB1-206ENST00000529210 GLRA2P23416 452 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 CAPSQ13938 189 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 KCNC3Q14003 757 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 GLB1LQ6UWU2 654 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 AGMOQ6ZNB7 445 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 THNSL1Q8IYQ7 743 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 ASAP3Q8TDY4 903 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 MSLNLQ96KJ4 702 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.26
COPB1-206ENST00000529210 NECAB3Q96P71 396 aaPredicted RBP13.4□□□□□ -0.26
COPB1-206ENST00000529210 NGRNQ9NPE2 291 aaKnown RBP13.4□□□□□ -0.26
COPB1-206ENST00000529210 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.4□□□□□ -0.26
COPB1-206ENST00000529210 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 PUF60Q9UHX1 559 aaKnown RBP13.4□□□□□ -0.26
COPB1-206ENST00000529210 PCDHB2Q9Y5E7 798 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 ZMYM2Q9UBW7 1377 aa13.4□□□□□ -0.26
COPB1-206ENST00000529210 H3BQ06 376 aaPredicted RBP13.39□□□□□ -0.27
COPB1-206ENST00000529210 TSPAN1O60635 241 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 TBX10O75333 385 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
COPB1-206ENST00000529210 ERVFC1P60507 584 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 KRT17Q04695 432 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 MBTD1Q05BQ5 628 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 COASYQ13057 564 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 PTGDRQ13258 359 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 SMAD2Q15796 467 aaKnown RBP13.39□□□□□ -0.27
COPB1-206ENST00000529210 DUSP6Q16828 381 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 FAM187BQ17R55 369 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 NOMO2Q5JPE7 1267 aa13.39□□□□□ -0.27
COPB1-206ENST00000529210 CDCA2Q69YH5 1023 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms