RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 STRCP1A6NGW2 1772 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 PIK3C2BO00750 1634 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 GOLGA6L22H0YM25 854 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 FOXP2O15409 715 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 LAMTOR5O43504 91 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
CSDE1-212ENST00000529046 KIF11P52732 1056 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 NFATC3Q12968 1075 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 STRN3Q13033 797 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 STAT4Q14765 748 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 DDX42Q86XP3 938 aaKnown RBP eCLIP6.52□□□□□ -1.37
CSDE1-212ENST00000529046 KBTBD2Q8IY47 623 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 RPUSD2Q8IZ73 545 aaKnown RBP6.52□□□□□ -1.37
CSDE1-212ENST00000529046 STPG3Q8N7X2 389 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.52□□□□□ -1.37
CSDE1-212ENST00000529046 NUDT10Q8NFP7 164 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 IGDCC4Q8TDY8 1250 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 NUDT11Q96G61 164 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 KCND1Q9NSA2 647 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 PLEKHG1Q9ULL1 1385 aa6.52□□□□□ -1.37
CSDE1-212ENST00000529046 ZFYVE9O95405 1425 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 KLHL18O94889 574 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 KNG1P01042 644 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 MMEP08473 750 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 CPEP16870 476 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 SLC9A1P19634 815 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 PTGS1P23219 599 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 ID4P47928 161 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 KPNA1P52294 538 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-212ENST00000529046 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 MOGSQ13724 837 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 STILQ15468 1287 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 TERF2Q15554 542 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 ZNF174Q15697 407 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 CT47A1Q5JQC4 288 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-212ENST00000529046 LHFPL2Q6ZUX7 228 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 ZZZ3Q8IYH5 903 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 USP7Q93009 1102 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 SLC39A2Q9NP94 309 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 MCM8Q9UJA3 840 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 ZDHHC9Q9Y397 364 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 PIK3R4Q99570 1358 aa6.51□□□□□ -1.37
CSDE1-212ENST00000529046 NKTRP30414 1462 aaKnown RBP6.51□□□□□ -1.37
CSDE1-212ENST00000529046 MED1Q15648 1581 aaPredicted RBP6.51□□□□□ -1.37
CSDE1-212ENST00000529046 ADGRB3O60242 1522 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 TMEM94Q12767 1356 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 PRAMEF25A6NGN4 478 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 CNGA1P29973 690 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 MAGEA10P43363 369 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-212ENST00000529046 CDKN1CP49918 316 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-212ENST00000529046 RNF219Q5W0B1 726 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-212ENST00000529046 GLB1LQ6UWU2 654 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 ARHGEF18Q6ZSZ5 1173 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 NECAB2Q7Z6G3 386 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 NME9Q86XW9 330 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 ZNF610Q8N9Z0 462 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 PRPF38AQ8NAV1 312 aaKnown RBP6.5□□□□□ -1.37
CSDE1-212ENST00000529046 BORCS6Q96GS4 357 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 LOXL4Q96JB6 756 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 GPR101Q96P66 508 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-212ENST00000529046 GBP4Q96PP9 640 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 FOXB1Q99853 325 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 TACO1Q9BSH4 297 aaKnown RBP6.5□□□□□ -1.37
CSDE1-212ENST00000529046 AMNQ9BXJ7 453 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 SMPD4Q9NXE4 827 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 ARHGAP28Q9P2N2 729 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 ADAM29Q9UKF5 820 aa6.5□□□□□ -1.37
CSDE1-212ENST00000529046 NWD1Q149M9 1564 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 H0Y858 1186 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 KRT37O76014 449 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 IL18BPO95998 194 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 CDK11BP21127 795 aaKnown RBP6.49□□□□□ -1.37
CSDE1-212ENST00000529046 IL2P60568 153 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 ALDH6A1Q02252 535 aaKnown RBP6.49□□□□□ -1.37
CSDE1-212ENST00000529046 FAM50AQ14320 339 aaKnown RBP6.49□□□□□ -1.37
CSDE1-212ENST00000529046 TMEM132BQ14DG7 1078 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 SART3Q15020 963 aaKnown RBP6.49□□□□□ -1.37
CSDE1-212ENST00000529046 ATP13A4Q4VNC1 1196 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 DBX2Q6ZNG2 339 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 Q6ZUG5 572 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 RALYLQ86SE5 291 aaKnown RBP6.49□□□□□ -1.37
CSDE1-212ENST00000529046 TTC9BQ8N6N2 239 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 SAMD11Q96NU1 681 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 PCIF1Q9H4Z3 704 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 GALNT8Q9NY28 637 aa6.49□□□□□ -1.37
CSDE1-212ENST00000529046 USP36Q9P275 1121 aaKnown RBP6.49□□□□□ -1.37
CSDE1-212ENST00000529046 UNC13BO14795 1591 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 B4GALT4O60513 344 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 ULK1O75385 1050 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 MC4RP32245 332 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 PPP2CBP62714 309 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 PPP2CAP67775 309 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 ADCY1Q08828 1119 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 KANK2Q63ZY3 851 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 KANSL1Q7Z3B3 1105 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 LIMS2Q7Z4I7 341 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 C11orf74Q86VG3 221 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 SPATS2Q86XZ4 545 aaKnown RBP6.48□□□□□ -1.37
CSDE1-212ENST00000529046 PASD1Q8IV76 773 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 WDR66Q8TBY9 1149 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms