RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 EXOSC10Q01780 885 aaKnown RBP12.99□□□□□ -0.33
CMTM1-211ENST00000528484 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 MIER3Q7Z3K6 550 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 GPR149Q86SP6 731 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 ADSSL1Q8N142 457 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 KCNG4Q8TDN1 519 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 CCDC136Q96JN2 1154 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 TRAIPQ9BWF2 469 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 SMOC2Q9H3U7 446 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 MRPL17Q9NRX2 175 aaKnown RBP12.99□□□□□ -0.33
CMTM1-211ENST00000528484 FAM105AQ9NUU6 356 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 TBC1D13Q9NVG8 400 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 IGSF9Q9P2J2 1179 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 KANSL3Q9P2N6 904 aa12.99□□□□□ -0.33
CMTM1-211ENST00000528484 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 CSDE1O75534 798 aaKnown RBP12.98□□□□□ -0.33
CMTM1-211ENST00000528484 GALTP07902 379 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 AOC1P19801 751 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 USP11P51784 963 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 PTPN14Q15678 1187 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 LONRF3Q496Y0 759 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 C15orf39Q6ZRI6 1047 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 RHPN2Q8IUC4 686 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 CCDC105Q8IYK2 499 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 LPPQ93052 612 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 NLRP4Q96MN2 994 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 NRDE2Q9H7Z3 1164 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 SUCLA2Q9P2R7 463 aaPredicted RBP12.98□□□□□ -0.33
CMTM1-211ENST00000528484 DUSP12Q9UNI6 340 aa12.98□□□□□ -0.33
CMTM1-211ENST00000528484 CNTNAP2Q9UHC6 1331 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 A0A087WZ62 844 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 MSH4O15457 936 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 PRPF3O43395 683 aaKnown RBP12.97□□□□□ -0.33
CMTM1-211ENST00000528484 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
CMTM1-211ENST00000528484 ALDH2P05091 517 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 URODP06132 367 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 TMEM173Q86WV6 379 aaPredicted RBP12.97□□□□□ -0.33
CMTM1-211ENST00000528484 SIX5Q8N196 739 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 SLC22A17Q8WUG5 538 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 FDXACB1Q9BRP7 624 aaPredicted RBP12.97□□□□□ -0.33
CMTM1-211ENST00000528484 NIFKQ9BYG3 293 aaKnown RBP12.97□□□□□ -0.33
CMTM1-211ENST00000528484 SEMA4AQ9H3S1 761 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 KCNK12Q9HB15 430 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
CMTM1-211ENST00000528484 FAN1Q9Y2M0 1017 aa12.97□□□□□ -0.33
CMTM1-211ENST00000528484 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 ZNF623O75123 536 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 NR1I2O75469 434 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 OFD1O75665 1012 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 SSBP05455 408 aaKnown RBP eCLIP12.96□□□□□ -0.33
CMTM1-211ENST00000528484 ADH1AP07327 375 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 GBP2P32456 591 aaPredicted RBP12.96□□□□□ -0.33
CMTM1-211ENST00000528484 SLC11A1P49279 550 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 CLCN4P51793 760 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 NLRP5P59047 1200 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 UGCGQ16739 394 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
CMTM1-211ENST00000528484 KANK3Q6NY19 840 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 ZC3H14Q6PJT7 736 aaKnown RBP12.96□□□□□ -0.33
CMTM1-211ENST00000528484 CYP26C1Q6V0L0 522 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 DTWD2Q8NBA8 298 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 SLC7A3Q8WY07 619 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 SLC5A5Q92911 643 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 LENG9Q96B70 501 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 KLHL5Q96PQ7 755 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 TMEM175Q9BSA9 504 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 SLC26A6Q9BXS9 759 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 RNF26Q9BY78 433 aaPredicted RBP12.96□□□□□ -0.33
CMTM1-211ENST00000528484 UBN1Q9NPG3 1134 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 PCDHB2Q9Y5E7 798 aa12.96□□□□□ -0.33
CMTM1-211ENST00000528484 FRYLO94915 3013 aa12.96□□□□□ -0.34
CMTM1-211ENST00000528484 DENND4AQ7Z401 1863 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 C2CD2LO14523 706 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 AK2P54819 239 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 NCBP1Q09161 790 aaKnown RBP12.95□□□□□ -0.34
CMTM1-211ENST00000528484 DRP2Q13474 957 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
CMTM1-211ENST00000528484 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 Q6ZUG5 572 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 TRIM22Q8IYM9 498 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 CNNM3Q8NE01 707 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 CMASQ8NFW8 434 aaPredicted RBP12.95□□□□□ -0.34
CMTM1-211ENST00000528484 BRF1Q92994 677 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 PHKBQ93100 1093 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 NXPE3Q969Y0 559 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 HINFPQ9BQA5 517 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 RSAD1Q9HA92 442 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 MAN1C1Q9NR34 630 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 DNAJB4Q9UDY4 337 aa12.95□□□□□ -0.34
CMTM1-211ENST00000528484 DMXL1Q9Y485 3027 aa12.94□□□□□ -0.34
CMTM1-211ENST00000528484 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
CMTM1-211ENST00000528484 GLUD1P00367 558 aa12.94□□□□□ -0.34
CMTM1-211ENST00000528484 LMNAP02545 664 aaKnown RBP12.94□□□□□ -0.34
CMTM1-211ENST00000528484 SOD2P04179 222 aa12.94□□□□□ -0.34
CMTM1-211ENST00000528484 CNPP09543 421 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms