RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 FERMT3Q86UX7 667 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 MICAL1Q8TDZ2 1067 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 TMEM143Q96AN5 459 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 SH2D3AQ9BRG2 576 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 IFT122Q9HBG6 1241 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 ALG13Q9NP73 1137 aaKnown RBP10.69□□□□□ -0.7
CHD7-208ENST00000528280 UBN1Q9NPG3 1134 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 KANSL3Q9P2N6 904 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 STK39Q9UEW8 545 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 DBR1Q9UK59 544 aaKnown RBP10.69□□□□□ -0.7
CHD7-208ENST00000528280 LZTS1Q9Y250 596 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 RALGAPA2Q2PPJ7 1873 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 CFAP54Q96N23 3096 aa10.69□□□□□ -0.7
CHD7-208ENST00000528280 H3BQV1 296 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 ERLIN2O94905 339 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 ITGB1P05556 798 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 ALDH7A1P49419 539 aaKnown RBP10.68□□□□□ -0.7
CHD7-208ENST00000528280 RARRES1P49788 294 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■■□□□ 12.9
CHD7-208ENST00000528280 PLCB3Q01970 1234 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 COL19A1Q14993 1142 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 RILPL1Q5EBL4 403 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 GLB1LQ6UWU2 654 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 ZNF598Q86UK7 904 aaKnown RBP10.68□□□□□ -0.7
CHD7-208ENST00000528280 CATSPER3Q86XQ3 398 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 KSR1Q8IVT5 923 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 THNSL1Q8IYQ7 743 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 HACE1Q8IYU2 909 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 LRRC43Q8N309 656 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 ZNF579Q8NAF0 562 aaKnown RBP10.68□□□□□ -0.7
CHD7-208ENST00000528280 RNF149Q8NC42 400 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 RNF169Q8NCN4 708 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 MCPH1Q8NEM0 835 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 POF1BQ8WVV4 589 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 CCDC51Q96ER9 411 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 TMX3Q96JJ7 454 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 ZNF668Q96K58 619 aaPredicted RBP10.68□□□□□ -0.7
CHD7-208ENST00000528280 ZNF558Q96NG5 402 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 CASD1Q96PB1 797 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 NFKBIZQ9BYH8 718 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 TMEM60Q9H2L4 133 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 NGRNQ9NPE2 291 aaKnown RBP10.68□□□□□ -0.7
CHD7-208ENST00000528280 SPG21Q9NZD8 308 aa10.68□□□□□ -0.7
CHD7-208ENST00000528280 WRAP73Q9P2S5 460 aaPredicted RBP10.68□□□□□ -0.7
CHD7-208ENST00000528280 PIN4Q9Y237 131 aaKnown RBP10.68□□□□□ -0.7
CHD7-208ENST00000528280 CNTNAP2Q9UHC6 1331 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 CSDE1O75534 798 aaKnown RBP10.67□□□□□ -0.7
CHD7-208ENST00000528280 FGF18O76093 207 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 FGFR1P11362 822 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 FGFR4P22455 802 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 KCNA5P22460 613 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 ARL2P36404 184 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 PRPHP41219 470 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 PTENP60484 403 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 KCNT2Q6UVM3 1135 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 MRPL10Q7Z7H8 261 aaKnown RBP10.67□□□□□ -0.7
CHD7-208ENST00000528280 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
CHD7-208ENST00000528280 COLGALT1Q8NBJ5 622 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 MRPS27Q92552 414 aaKnown RBP10.67□□□□□ -0.7
CHD7-208ENST00000528280 TBC1D32Q96NH3 1257 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 CDCA3Q99618 268 aaPredicted RBP10.67□□□□□ -0.7
CHD7-208ENST00000528280 CWH43Q9H720 699 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 TLR9Q9NR96 1032 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 AGPAT5Q9NUQ2 364 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 FAM105AQ9NUU6 356 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 LRWD1Q9UFC0 647 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 KCNG1Q9UIX4 513 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 SMC3Q9UQE7 1217 aa10.67□□□□□ -0.7
CHD7-208ENST00000528280 ZBTB39O15060 712 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 SPATA31C1P0DKV0 1188 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 SRGAP2BP0DMP2 458 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 ALADP13716 330 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 GATMP50440 423 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 PTGDRQ13258 359 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 ADAM15Q13444 863 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 CTC1Q2NKJ3 1217 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 MCTP1Q6DN14 999 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 NOTUMQ6P988 496 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 DTHD1Q6ZMT9 781 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 EP400NLQ6ZTU2 488 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 C4orf32Q8N8J7 132 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 URGCPQ8TCY9 931 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 PIGOQ8TEQ8 1089 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 C2orf40Q9H1Z8 148 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 TLE6Q9H808 572 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 CLDND1Q9NY35 253 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 DNM3Q9UQ16 869 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 PCDHB2Q9Y5E7 798 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 NLRC5Q86WI3 1866 aa10.66□□□□□ -0.7
CHD7-208ENST00000528280 TRIOO75962 3097 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 ARHGEF35A5YM69 484 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 GRXCR2A6NFK2 248 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 POTEMA6NI47 508 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 INO80B-WBP1J3KQ70 363 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 WNT7AO00755 349 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 ALDH2P05091 517 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 CYP11B2P19099 503 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 NCLP19338 710 aaKnown RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 PDCP20941 246 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms