RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 CEP89Q96ST8 783 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 CDY2AQ9Y6F7 541 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 NRCAMQ92823 1304 aa12.86□□□□□ -0.35
CCDC90B-210ENST00000528149 RSPH10B2B2RC85 870 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 E9PMD0 336 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 BFSP2Q13515 415 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 LPIN1Q14693 890 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 PTPROQ16827 1216 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 XKR9Q5GH70 373 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 FBXL6Q8N531 539 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 PDILTQ8N807 584 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 FSIP1Q8NA03 581 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 DBF4BQ8NFT6 615 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 CAGE1Q8TC20 777 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 TMEM40Q8WWA1 233 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 CCDC43Q96MW1 224 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 PANK2Q9BZ23 570 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 GOLPH3LQ9H4A5 285 aa12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-210ENST00000528149 MICAL3Q7RTP6 2002 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 KMT2BQ9UMN6 2715 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 A0A1B0GVL5 298 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 SLC26A4O43511 780 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 CXCL10P02778 98 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 PFKFB1P16118 471 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 MUTP22033 750 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 FGFR4P22455 802 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 LTBRP36941 435 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 ADALQ6DHV7 355 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 CNKSR3Q6P9H4 555 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 RPAINQ86UA6 219 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 KIAA0319LQ8IZA0 1049 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 LINC01465Q8N7H1 131 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 CEP170P1Q96L14 293 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 CYP26B1Q9NR63 512 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 NRBP2Q9NSY0 501 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 CCDC39Q9UFE4 941 aa12.84□□□□□ -0.35
CCDC90B-210ENST00000528149 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.35
CCDC90B-210ENST00000528149 ARHGEF35A5YM69 484 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 GOLGA6L4A6NEF3 574 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 RRN3P2A6NIE6 340 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 GADD45BO75293 160 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 KRT37O76014 449 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 EYA4O95677 639 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 IBSPP21815 317 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 CD52P31358 61 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 STAT6P42226 847 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 ID4P47928 161 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 RARRES1P49788 294 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 MRPS6P82932 125 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 DLX2Q07687 328 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 TBC1D8BQ0IIM8 1120 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 TARBP2Q15633 366 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 ZNF484Q5JVG2 852 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 RRAGBQ5VZM2 374 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 OTUD6AQ7L8S5 288 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 KSR1Q8IVT5 923 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 MRPS27Q92552 414 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 DHX58Q96C10 678 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 GBP4Q96PP9 640 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 NIFKQ9BYG3 293 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 BHMT2Q9H2M3 363 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 NSUN3Q9H649 340 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 POLD4Q9HCU8 107 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 ANKEF1Q9NU02 776 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 FAM13BQ9NYF5 915 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 GINS2Q9Y248 185 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 DNAH14Q0VDD8 3507 aa12.83□□□□□ -0.36
CCDC90B-210ENST00000528149 A0A1W2PQ27 194 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 A0A1W2PQ64 194 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 A0A1W2PQD8 194 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 PRR23AA6NEV1 266 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 PROB1E7EW31 1015 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 H0Y858 1186 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 MBTPS2O43462 519 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 MGEA5O60502 916 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 GNAT1P11488 350 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 CMA1P23946 247 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 POLGP54098 1239 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 ZXDAP98168 799 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 MCM6Q14566 821 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 EMC2Q15006 297 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 KIZQ2M2Z5 673 aa12.82□□□□□ -0.36
CCDC90B-210ENST00000528149 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms