RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 SPEM2Q0P670 501 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 MBTPS1Q14703 1052 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 NAA30Q147X3 362 aaPredicted RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 NONOQ15233 471 aaKnown RBP eCLIP4.7□□□□□ -1.66
CHD7-205ENST00000527825 DGKDQ16760 1214 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 DUSP6Q16828 381 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 ZSCAN23Q3MJ62 389 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 N4BP2L1Q5TBK1 243 aaPredicted RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 PDE12Q6L8Q7 609 aaKnown RBP4.7□□□□□ -1.66
CHD7-205ENST00000527825 CHST3Q7LGC8 479 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 SIAH1Q8IUQ4 282 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 ATP8B4Q8TF62 1192 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 SCFD2Q8WU76 684 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 CASP10Q92851 521 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 DYNLL2Q96FJ2 89 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 SLC30A3Q99726 388 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 S1PR5Q9H228 398 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 POMKQ9H5K3 350 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 COPRSQ9NQ92 184 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 CYP26B1Q9NR63 512 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 CYP39A1Q9NYL5 469 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 CA14Q9ULX7 337 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 SIT1Q9Y3P8 196 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 PCDHB12Q9Y5F1 795 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 OTOGLQ3ZCN5 2332 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 TTC3P53804 2025 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 WDR87Q6ZQQ6 2873 aa4.7□□□□□ -1.66
CHD7-205ENST00000527825 DMDP11532 3685 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 ELOA3CA0A087WX78 387 aaPredicted RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 LOC102724159A0A0B4J2E5 919 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 RBM47A0AV96 593 aaKnown RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 PTPDC1A2A3K4 754 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 ELOA3DA6NLF2 546 aaPredicted RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 F5H6K3 240 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 TBC1D4O60343 1298 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 MICAL2O94851 1124 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 NDUFB10O96000 172 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 CTSHP09668 335 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 CYP2D6P10635 497 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 CA8P35219 290 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 ZAP70P43403 619 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 IDH3AP50213 366 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 NUCB2P80303 420 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 NUCB1Q02818 461 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 CSTF1Q05048 431 aaKnown RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 UBE3AQ05086 875 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 KLRC3Q07444 240 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 G3BP1Q13283 466 aaKnown RBP eCLIP4.69□□□□□ -1.66
CHD7-205ENST00000527825 CAMK1Q14012 370 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 PWP2Q15269 919 aaKnown RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 ELOA3BQ3SY89 546 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 PAN2Q504Q3 1202 aaKnown RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 PLPP4Q5VZY2 271 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 XRRA1Q6P2D8 792 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 C16orf46Q6P387 395 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 TMEM87AQ8NBN3 555 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 ELOA3Q8NG57 546 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 CHURC1Q8WUH1 139 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 AFG1LQ8WV93 481 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 COPS5Q92905 334 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 IFT43Q96FT9 208 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 CTAGE1Q96RT6 745 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 MDFIQ99750 246 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 SAP130Q9H0E3 1048 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 RBSNQ9H1K0 784 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 TBC1D17Q9HA65 648 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 PIH1D3Q9NQM4 214 aaKnown RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 ENTPD7Q9NQZ7 604 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 SMC4Q9NTJ3 1288 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 LMBRD1Q9NUN5 540 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 SPTLC3Q9NUV7 552 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 SPATA6Q9NWH7 488 aaPredicted RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 FAM13BQ9NYF5 915 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 DDX19BQ9UMR2 479 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 DUSP12Q9UNI6 340 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 PCDHGA2Q9Y5H1 932 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 MRPL42Q9Y6G3 142 aaKnown RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.69□□□□□ -1.66
CHD7-205ENST00000527825 MYH15Q9Y2K3 1946 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 CACNA1IQ9P0X4 2223 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 PTPRCP08575 1304 aa4.69□□□□□ -1.66
CHD7-205ENST00000527825 FRYLO94915 3013 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 GCN1Q92616 2671 aaKnown RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 CARNS1A5YM72 827 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 SRRM3A6NNA2 597 aaPredicted RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 TAF4O00268 1085 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 SRGAP3O43295 1099 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 FOXD2O60548 495 aaPredicted RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 SIN3BO75182 1162 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 GH1P01241 217 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 STAG3L1P0CL83 205 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 BMP3P12645 472 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 ALAS2P22557 587 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 CALML3P27482 149 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 CDK8P49336 464 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 STAT2P52630 851 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 SYCP1Q15431 976 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 KIAA0753Q2KHM9 967 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 TRIM71Q2Q1W2 868 aaKnown RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 ZNF528Q3MIS6 628 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms