RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ZNF558Q96NG5 402 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 ANKEF1Q9NU02 776 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 PUF60Q9UHX1 559 aaKnown RBP21.48■■□□□ 1.03
CAPN1-211ENST00000527739 NOL7Q9UMY1 257 aaKnown RBP21.48■■□□□ 1.03
CAPN1-211ENST00000527739 LINC01565O15544 149 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 UBE3AQ05086 875 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 TTC38Q5R3I4 469 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 KCNT2Q6UVM3 1135 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 ADGRD2Q7Z7M1 963 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 ZNF598Q86UK7 904 aaKnown RBP21.47■■□□□ 1.03
CAPN1-211ENST00000527739 FERMT3Q86UX7 667 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 NOSTRINQ8IVI9 506 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 TLR9Q9NR96 1032 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 INPP5FQ9Y2H2 1132 aa21.47■■□□□ 1.03
CAPN1-211ENST00000527739 ARIH1Q9Y4X5 557 aaPredicted RBP21.47■■□□□ 1.03
CAPN1-211ENST00000527739 MYO7AQ13402 2215 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 LYPLA2O95372 231 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 OR52Z1P0C646 297 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 ATF7P17544 494 aaPredicted RBP21.46■■□□□ 1.03
CAPN1-211ENST00000527739 LTBRP36941 435 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 NDUFV1P49821 464 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 KRT17Q04695 432 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 MAEAQ7L5Y9 396 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 ERMNQ8TAM6 284 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 TLE6Q9H808 572 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 MINDY3Q9H8M7 445 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 FAM105AQ9NUU6 356 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 FAM50BQ9Y247 325 aa21.46■■□□□ 1.03
CAPN1-211ENST00000527739 PER2O15055 1255 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 DGAT1O75907 488 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 ERLIN2O94905 339 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 RAB27AP51159 221 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 ERVFC1P60507 584 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 DLX2Q07687 328 aaPredicted RBP21.45■■□□□ 1.02
CAPN1-211ENST00000527739 ADAM15Q13444 863 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 TFDP1Q14186 410 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 MXD4Q14582 209 aaPredicted RBP21.45■■□□□ 1.02
CAPN1-211ENST00000527739 MRPL9Q9BYD2 267 aaKnown RBP21.45■■□□□ 1.02
CAPN1-211ENST00000527739 XPNPEP1Q9NQW7 623 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 SPG21Q9NZD8 308 aa21.45■■□□□ 1.02
CAPN1-211ENST00000527739 INO80B-WBP1J3KQ70 363 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 USO1O60763 962 aaKnown RBP21.44■■□□□ 1.02
CAPN1-211ENST00000527739 CA8P35219 290 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 ALDH7A1P49419 539 aaKnown RBP21.44■■□□□ 1.02
CAPN1-211ENST00000527739 RARRES1P49788 294 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 RNASELQ05823 741 aaKnown RBP21.44■■□□□ 1.02
CAPN1-211ENST00000527739 NCBP1Q09161 790 aaKnown RBP21.44■■□□□ 1.02
CAPN1-211ENST00000527739 NBR1Q14596 966 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 CTC1Q2NKJ3 1217 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 PLPP4Q5VZY2 271 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 MCTP1Q6DN14 999 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 GLB1LQ6UWU2 654 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 CATSPER3Q86XQ3 398 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 MRPS27Q92552 414 aaKnown RBP21.44■■□□□ 1.02
CAPN1-211ENST00000527739 PGBD4Q96DM1 585 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 ENTPD7Q9NQZ7 604 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 AGPAT5Q9NUQ2 364 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 KIF3AQ9Y496 699 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 PCDHB2Q9Y5E7 798 aa21.44■■□□□ 1.02
CAPN1-211ENST00000527739 WDR81Q562E7 1941 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 PRR33A8MZF0 331 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 NT5C1B-RDH14C9J2C7 533 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 MED24O75448 989 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 SPATA31C1P0DKV0 1188 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 XRCC6P12956 609 aaKnown RBP eCLIP21.43■■□□□ 1.02
CAPN1-211ENST00000527739 PPM1AP35813 382 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 PLCB3Q01970 1234 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 ZP2Q05996 745 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 ORC2Q13416 577 aaPredicted RBP21.43■■□□□ 1.02
CAPN1-211ENST00000527739 ASAP3Q8TDY4 903 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 TCF25Q9BQ70 676 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 TRAIPQ9BWF2 469 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 GBP3Q9H0R5 595 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 TUFT1Q9NNX1 390 aa21.43■■□□□ 1.02
CAPN1-211ENST00000527739 MEIS3P2A8K0S8 358 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 ZC3H11AO75152 810 aaKnown RBP eCLIP21.42■■□□□ 1.02
CAPN1-211ENST00000527739 TRAPPC10P48553 1259 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 BCAR1P56945 870 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 NOMO2Q5JPE7 1267 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 PDE12Q6L8Q7 609 aaKnown RBP21.42■■□□□ 1.02
CAPN1-211ENST00000527739 TMC7Q7Z402 723 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 EFHBQ8N7U6 833 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 NACC1Q96RE7 527 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 POLR3FQ9H1D9 316 aaPredicted RBP21.42■■□□□ 1.02
CAPN1-211ENST00000527739 CD207Q9UJ71 328 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 LZTS1Q9Y250 596 aa21.42■■□□□ 1.02
CAPN1-211ENST00000527739 ZNF623O75123 536 aa21.41■■□□□ 1.02
CAPN1-211ENST00000527739 TBX10O75333 385 aa21.41■■□□□ 1.02
CAPN1-211ENST00000527739 HOXA11P31270 313 aaPredicted RBP21.41■■□□□ 1.02
CAPN1-211ENST00000527739 ARL2P36404 184 aa21.41■■□□□ 1.02
CAPN1-211ENST00000527739 PTENP60484 403 aa21.41■■□□□ 1.02
CAPN1-211ENST00000527739 POTEGQ6S5H5 508 aa21.41■■□□□ 1.02
CAPN1-211ENST00000527739 CPB2Q96IY4 423 aa21.41■■□□□ 1.02
CAPN1-211ENST00000527739 TMX3Q96JJ7 454 aa21.41■■□□□ 1.02
CAPN1-211ENST00000527739 POLR3CQ9BUI4 534 aaPredicted RBP21.41■■□□□ 1.02
CAPN1-211ENST00000527739 C5orf42Q9H799 3197 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 C19orf67A6NJJ6 358 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 OFD1O75665 1012 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 ALADP13716 330 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 U2AF2P26368 475 aaKnown RBP eCLIP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms