RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HSPBP1Q9NZL4 362 aa16.66■□□□□ 0.26
USH1C-207ENST00000527720 CCDC188H7C350 402 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 PGRMC1O00264 195 aaKnown RBP16.65■□□□□ 0.26
USH1C-207ENST00000527720 EGFRP00533 1210 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 GLI1P08151 1106 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 TNFAIP3P21580 790 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 CCND2P30279 289 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 BACE1P56817 501 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 EPC2Q52LR7 807 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 NT5DC3Q86UY8 548 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 SCYL3Q8IZE3 742 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 RASGEF1CQ8N431 466 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 RDH13Q8NBN7 331 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 AFAP1L1Q8TED9 768 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 CTNNBL1Q8WYA6 563 aaPredicted RBP16.65■□□□□ 0.26
USH1C-207ENST00000527720 KRT12Q99456 494 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.65■□□□□ 0.26
USH1C-207ENST00000527720 ZNF112Q9UJU3 913 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 SCAF8Q9UPN6 1271 aaKnown RBP16.65■□□□□ 0.26
USH1C-207ENST00000527720 DIS3Q9Y2L1 958 aaKnown RBP16.65■□□□□ 0.26
USH1C-207ENST00000527720 MYH9P35579 1960 aaKnown RBP16.65■□□□□ 0.26
USH1C-207ENST00000527720 NFKBIEO00221 500 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 BACH1O14867 736 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 DKC1O60832 514 aaKnown RBP eCLIP16.65■□□□□ 0.26
USH1C-207ENST00000527720 ATP9AO75110 1047 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 PHACTR2O75167 634 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 SMTNP53814 917 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 DGKZQ13574 1117 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 UGCGQ16739 394 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 DAAM2Q86T65 1068 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 VSIG10LQ86VR7 867 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 HES6Q96HZ4 224 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 CBWD1Q9BRT8 395 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 PCIF1Q9H4Z3 704 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 C17orf75Q9HAS0 396 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 RNF146Q9NTX7 359 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 HACL1Q9UJ83 578 aa16.65■□□□□ 0.26
USH1C-207ENST00000527720 ANKRD62A6NC57 917 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 OPA1O60313 960 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 CCNE2O96020 404 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 XKR9Q5GH70 373 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 NSMFQ6X4W1 530 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 NLRX1Q86UT6 975 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 MICALL2Q8IY33 904 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 MREGQ8N565 214 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 METTL13Q8N6R0 699 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 SH3GL2Q99962 352 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 MOV10L1Q9BXT6 1211 aaKnown RBP16.64■□□□□ 0.25
USH1C-207ENST00000527720 EPB41L5Q9HCM4 733 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 AMFRQ9UKV5 643 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 TTC7AQ9ULT0 858 aaPredicted RBP16.64■□□□□ 0.25
USH1C-207ENST00000527720 LTBP3Q9NS15 1303 aa16.64■□□□□ 0.25
USH1C-207ENST00000527720 LOC285556D6RIA3 1793 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 TESPA1A2RU30 521 aaPredicted RBP16.63■□□□□ 0.25
USH1C-207ENST00000527720 CEP104O60308 925 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 ACTN2P35609 894 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 HADHBP55084 474 aaKnown RBP16.63■□□□□ 0.25
USH1C-207ENST00000527720 PEX3P56589 373 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 DLG4P78352 724 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 GUCY2DQ02846 1103 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 ARHGAP44Q17R89 818 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 ATG4CQ96DT6 458 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 AGPAT1Q99943 283 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 PCDHA10Q9Y5I2 948 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 TMCO5BA8MYB1 307 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 GOLGA8KD6RF30 607 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 FOXN3O00409 490 aaPredicted RBP16.63■□□□□ 0.25
USH1C-207ENST00000527720 SLC16A4O15374 487 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 RPS6KA5O75582 802 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 GMPSP49915 693 aaPredicted RBP16.63■□□□□ 0.25
USH1C-207ENST00000527720 MRPS25P82663 173 aaKnown RBP16.63■□□□□ 0.25
USH1C-207ENST00000527720 PPATQ06203 517 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 PPP3CAQ08209 521 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 TCEAL1Q15170 157 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 DEFB132Q7Z7B7 95 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 ZNF280CQ8ND82 737 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 REPS2Q8NFH8 660 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 KIFAP3Q92845 792 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 HINFPQ9BQA5 517 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 UBE2TQ9NPD8 197 aaPredicted RBP16.63■□□□□ 0.25
USH1C-207ENST00000527720 ADAMTS5Q9UNA0 930 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 DOCK5Q9H7D0 1870 aa16.63■□□□□ 0.25
USH1C-207ENST00000527720 HSF2BPO75031 334 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 NR3C2P08235 984 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 CAPN2P17655 700 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
USH1C-207ENST00000527720 C1orf220Q5T0J3 134 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 FAM102BQ5T8I3 360 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 NBPF12Q5TAG4 269 aaPredicted RBP16.62■□□□□ 0.25
USH1C-207ENST00000527720 LEKR1Q6ZMV7 388 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 DNAAF5Q86Y56 855 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 RHOT2Q8IXI1 618 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 SPIRE2Q8WWL2 714 aa16.62■□□□□ 0.25
USH1C-207ENST00000527720 NTPCRQ9BSD7 190 aaKnown RBP16.62■□□□□ 0.25
USH1C-207ENST00000527720 CNOT7Q9UIV1 285 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms