RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 R3HDM2Q9Y2K5 976 aaKnown RBP8.06□□□□□ -1.12
SOX6-208ENST00000527619 SLC30A1Q9Y6M5 507 aa8.06□□□□□ -1.12
SOX6-208ENST00000527619 RGPD8O14715 1765 aaPredicted RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 RGPD2P0DJD1 1756 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 TRIM43BA6NCK2 446 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 CCDC169A6NNP5 214 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 GSTA2P09210 222 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 NUDT17P0C025 328 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 RPL17P18621 184 aaKnown RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 ITGA6P23229 1130 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 LONP1P36776 959 aaKnown RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 TUBA1BP68363 451 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 DIXDC1Q155Q3 683 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 DDB1Q16531 1140 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 TDRD12Q587J7 1177 aaKnown RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 OR52E8Q6IFG1 317 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 TUBA1AQ71U36 451 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 SESTD1Q86VW0 696 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.05□□□□□ -1.12
SOX6-208ENST00000527619 FANCBQ8NB91 859 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 SMC1BQ8NDV3 1235 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 STK32AQ8WU08 396 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 IP6K1Q92551 441 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 BAP1Q92560 729 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 LRRC59Q96AG4 307 aaKnown RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 EEF2KMTQ96G04 330 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 TXLNGYQ9BZA5 131 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 SLITRK6Q9H5Y7 841 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 ZMYND8Q9ULU4 1186 aaPredicted RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 MAFFQ9ULX9 164 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 TRIM33Q9UPN9 1127 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 TIAM2Q8IVF5 1701 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 PGRMC1O00264 195 aaKnown RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 RGS16O15492 202 aaPredicted RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 PEX11AO75192 247 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 GJB6O95452 261 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 AGTP01019 485 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 CYP1A2P05177 515 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 TPBGLP0DKB5 382 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 KLRC1P26715 233 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 IFNAR2P48551 515 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 PMS2P54278 862 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 CAMK2BQ13554 666 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 USH1GQ495M9 461 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 HGSNATQ68CP4 663 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 PHLDB3Q6NSJ2 640 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 CCDC84Q86UT8 332 aaPredicted RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 ASAP3Q8TDY4 903 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 DNAJC9Q8WXX5 260 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 SEC14L1Q92503 715 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 ABHD8Q96I13 439 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 SNX27Q96L92 541 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 FMO2Q99518 471 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 AZI2Q9H6S1 392 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 DMAP1Q9NPF5 467 aaPredicted RBP8.05□□□□□ -1.12
SOX6-208ENST00000527619 DISC1Q9NRI5 854 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 RHBDL2Q9NX52 303 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 EFR3BQ9Y2G0 817 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 ARL2BPQ9Y2Y0 163 aa8.05□□□□□ -1.12
SOX6-208ENST00000527619 PPP1R2P41236 205 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SERPINB4P48594 390 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 RASA2Q15283 850 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 TOMM20Q15388 145 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 ALX1Q15699 326 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 PARP6Q2NL67 630 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SLC9C1Q4G0N8 1177 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 TTC39BQ5VTQ0 682 aaPredicted RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 SMYD5Q6GMV2 418 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 CROCCP2Q86T23 111 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 C11orf74Q86VG3 221 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 COL23A1Q86Y22 540 aaPredicted RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 ENDOVQ8N8Q3 282 aaKnown RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 DEPTORQ8TB45 409 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 TBC1D16Q8TBP0 767 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SUN5Q8TC36 379 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 PIGOQ8TEQ8 1089 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 TNFRSF25Q93038 417 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 AP1M1Q9BXS5 423 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 EDEM3Q9BZQ6 932 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 DDX47Q9H0S4 455 aaKnown RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 CHST12Q9NRB3 414 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 CTTNBP2NLQ9P2B4 639 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SCOCQ9UIL1 159 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SH3GLB1Q9Y371 365 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 UTP11Q9Y3A2 253 aaKnown RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 NOC2LQ9Y3T9 749 aaKnown RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 FAM25EA8MYX2 175 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 KRIT1O00522 736 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 TTI1O43156 1089 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SGTAO43765 313 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SUPT3HO75486 399 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 PRDM1O75626 825 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SERPING1P05155 500 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 HALP42357 657 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 TRAPPC10P48553 1259 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 BPIFB4P59827 614 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 PPIDQ08752 370 aaKnown RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 PDAP1Q13442 181 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms