RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 DEFB118Q96PH6 123 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 BAG1Q99933 345 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 TUBGCP2Q9BSJ2 902 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 C17orf75Q9HAS0 396 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 GCNT3O95395 438 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 MYBP10242 640 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 CCL5P13501 91 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 NPTX2P47972 431 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 CLCN3P51790 818 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 RTP1P59025 263 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 DMP1Q13316 513 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 HIC1Q14526 733 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 ZC2HC1CQ53FD0 456 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 MTHFD1LQ6UB35 978 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 TMEM139Q8IV31 216 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 C7orf31Q8N865 590 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 CPLX3Q8WVH0 158 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 CNOT6LQ96LI5 555 aaKnown RBP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 C16orf45Q96MC5 204 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 JPH2Q9BR39 696 aaPredicted RBP20.62■□□□□ 0.89
SMPD1-203ENST00000527275 HDAC6Q9UBN7 1215 aa20.62■□□□□ 0.89
SMPD1-203ENST00000527275 RRN3P2A6NIE6 340 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 CCDC169A6NNP5 214 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 LGALS16A8MUM7 142 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 MAGEB2O15479 319 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 GAS2O43903 313 aaKnown RBP20.61■□□□□ 0.89
SMPD1-203ENST00000527275 FGFR1OPO95684 399 aaKnown RBP20.61■□□□□ 0.89
SMPD1-203ENST00000527275 GLRA2P23416 452 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 CEP135Q66GS9 1140 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 RETREG2Q8NC44 543 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 ASAP3Q8TDY4 903 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 PRPF31Q8WWY3 499 aaKnown RBP20.61■□□□□ 0.89
SMPD1-203ENST00000527275 TSG101Q99816 390 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 KIFC3Q9BVG8 833 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 GJB1P08034 283 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 PRKCSHP14314 528 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-203ENST00000527275 ACLYP53396 1101 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 PKN2Q16513 984 aaKnown RBP20.61■□□□□ 0.89
SMPD1-203ENST00000527275 NBPF20Q3BBV1 942 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 IER5Q5VY09 327 aa20.61■□□□□ 0.89
SMPD1-203ENST00000527275 EPM2AIP1Q7L775 607 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-203ENST00000527275 NTPCRQ9BSD7 190 aaKnown RBP20.61■□□□□ 0.89
SMPD1-203ENST00000527275 MKI67P46013 3256 aaKnown RBP20.6■□□□□ 0.89
SMPD1-203ENST00000527275 FRMPD3Q5JV73 1810 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 PES1O00541 588 aaKnown RBP20.6■□□□□ 0.89
SMPD1-203ENST00000527275 SLC16A4O15374 487 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 STX10O60499 249 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 PRPF6O94906 941 aaKnown RBP20.6■□□□□ 0.89
SMPD1-203ENST00000527275 TPM2P07951 284 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 MTIF2P46199 727 aaKnown RBP20.6■□□□□ 0.89
SMPD1-203ENST00000527275 KCNA1Q09470 495 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 NFRKBQ6P4R8 1299 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 FOXR2Q6PJQ5 311 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 KSR1Q8IVT5 923 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 ARRDC4Q8NCT1 418 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 ZNF507Q8TCN5 953 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 TCP11Q8WWU5 503 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
SMPD1-203ENST00000527275 IFT74Q96LB3 600 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 PANX2Q96RD6 677 aa20.6■□□□□ 0.89
SMPD1-203ENST00000527275 TRIP12Q14669 1992 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-203ENST00000527275 K7ENM7 598 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 ARHGAP6O43182 974 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 KIF20AO95235 890 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 TPM1P09493 284 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 CASP14P31944 242 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 DNM2P50570 870 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 SMTNP53814 917 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 ADAM17P78536 824 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 NELFCDQ8IXH7 590 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 ZNF333Q96JL9 665 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 KMT5AQ9NQR1 393 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 SUCLA2Q9P2R7 463 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-203ENST00000527275 ADGRA3Q8IWK6 1321 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 GYPCP04921 128 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 TNNT1P13805 278 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 HOXD13P35453 343 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 ZNF200P98182 395 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-203ENST00000527275 HAUS6Q7Z4H7 955 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 RHPN2Q8IUC4 686 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 LINC01465Q8N7H1 131 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 SPIRE2Q8WWL2 714 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 STRA6Q9BX79 667 aa20.59■□□□□ 0.89
SMPD1-203ENST00000527275 GRIN2DO15399 1336 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 A0A1W2PQC6 194 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 MBLAC1A4D2B0 266 aaPredicted RBP20.58■□□□□ 0.89
SMPD1-203ENST00000527275 MOXD2PA6NHM9 499 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 MFAP3LO75121 409 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 PPP1R37O75864 691 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 MAPTP10636 758 aaKnown RBP20.58■□□□□ 0.89
SMPD1-203ENST00000527275 TERF1P54274 439 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 NCKAP1LP55160 1127 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 LAMTOR4Q0VGL1 99 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 TRIM14Q14142 442 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 TMEM161BQ8NDZ6 487 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 VTI1AQ96AJ9 217 aa20.58■□□□□ 0.89
SMPD1-203ENST00000527275 TSEN34Q9BSV6 310 aaKnown RBP20.58■□□□□ 0.89
SMPD1-203ENST00000527275 TREHO43280 583 aa20.58■□□□□ 0.88
SMPD1-203ENST00000527275 TMOD1P28289 359 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms