RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 RPA1P27694 616 aa17.91■□□□□ 0.46
CTSB-213ENST00000527215 PTGDRQ13258 359 aa17.91■□□□□ 0.46
CTSB-213ENST00000527215 MXD4Q14582 209 aaPredicted RBP17.91■□□□□ 0.46
CTSB-213ENST00000527215 POTEGQ6S5H5 508 aa17.91■□□□□ 0.46
CTSB-213ENST00000527215 ASAP3Q8TDY4 903 aa17.91■□□□□ 0.46
CTSB-213ENST00000527215 LPPQ93052 612 aa17.91■□□□□ 0.46
CTSB-213ENST00000527215 NACC1Q96RE7 527 aa17.91■□□□□ 0.46
CTSB-213ENST00000527215 SMC3Q9UQE7 1217 aa17.91■□□□□ 0.46
CTSB-213ENST00000527215 FGF18O76093 207 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 SKIP12755 728 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 IRS1P35568 1242 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 ARL2P36404 184 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 FXR2P51116 673 aaKnown RBP eCLIP17.9■□□□□ 0.46
CTSB-213ENST00000527215 RAB27AP51159 221 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 PTENP60484 403 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 CAPSQ13938 189 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 TFDP1Q14186 410 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 CSPP1Q1MSJ5 1256 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 LONRF3Q496Y0 759 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 EP400NLQ6ZTU2 488 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 THNSL1Q8IYQ7 743 aa17.9■□□□□ 0.46
CTSB-213ENST00000527215 PABPC5Q96DU9 382 aaKnown RBP17.9■□□□□ 0.46
CTSB-213ENST00000527215 DBR1Q9UK59 544 aaKnown RBP17.9■□□□□ 0.46
CTSB-213ENST00000527215 MEIS3P2A8K0S8 358 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 H3BQV1 296 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 GLRA2P23416 452 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 HOXA11P31270 313 aaPredicted RBP17.89■□□□□ 0.45
CTSB-213ENST00000527215 GTF2F1P35269 517 aaKnown RBP eCLIP17.89■□□□□ 0.45
CTSB-213ENST00000527215 HYAL1Q12794 435 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 COL19A1Q14993 1142 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 LEXMQ3ZCV2 418 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 HAUS3Q68CZ6 603 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 MAEAQ7L5Y9 396 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 ADGRD2Q7Z7M1 963 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 BACH2Q9BYV9 841 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 POLR3FQ9H1D9 316 aaPredicted RBP17.89■□□□□ 0.45
CTSB-213ENST00000527215 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.89■□□□□ 0.45
CTSB-213ENST00000527215 CLDND1Q9NY35 253 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 LRWD1Q9UFC0 647 aa17.89■□□□□ 0.45
CTSB-213ENST00000527215 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.89■□□□□ 0.45
CTSB-213ENST00000527215 INO80B-WBP1J3KQ70 363 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 ZNF623O75123 536 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 ERLIN2O94905 339 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 CCT6AP40227 531 aaKnown RBP17.88■□□□□ 0.45
CTSB-213ENST00000527215 PBX3P40426 434 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 UBE3AQ05086 875 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 PUS10Q3MIT2 529 aaKnown RBP17.88■□□□□ 0.45
CTSB-213ENST00000527215 KCNT2Q6UVM3 1135 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 IFNLR1Q8IU57 520 aaPredicted RBP17.88■□□□□ 0.45
CTSB-213ENST00000527215 ZNF558Q96NG5 402 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 MRPL9Q9BYD2 267 aaKnown RBP17.88■□□□□ 0.45
CTSB-213ENST00000527215 IGFLR1Q9H665 355 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 GPRC5CQ9NQ84 441 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 PCDHB2Q9Y5E7 798 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 PCDHGC5Q9Y5F6 944 aa17.88■□□□□ 0.45
CTSB-213ENST00000527215 ARHGEF35A5YM69 484 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 H3BQ06 376 aaPredicted RBP17.87■□□□□ 0.45
CTSB-213ENST00000527215 LAD1O00515 517 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 NCK2O43639 380 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 TSPAN1O60635 241 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 MUTP22033 750 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 MBTD1Q05BQ5 628 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 POU5F1BQ06416 359 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 PDIA5Q14554 519 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 ECM1Q16610 540 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 RILPL1Q5EBL4 403 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 UBXN11Q5T124 520 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 PADI6Q6TGC4 694 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 IGSF22Q8N9C0 903 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 MCPH1Q8NEM0 835 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.87■□□□□ 0.45
CTSB-213ENST00000527215 RAB34Q9BZG1 259 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 TLR9Q9NR96 1032 aa17.87■□□□□ 0.45
CTSB-213ENST00000527215 MYH15Q9Y2K3 1946 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 PP2D1A8MPX8 630 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 PPM1AP35813 382 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 LTBRP36941 435 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 PRPHP41219 470 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 ERVFC1P60507 584 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 PLCB3Q01970 1234 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 PCBP1Q15365 356 aaKnown RBP eCLIP17.86■□□□□ 0.45
CTSB-213ENST00000527215 IL17AQ16552 155 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 CTC1Q2NKJ3 1217 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 LARP1BQ659C4 914 aaKnown RBP17.86■□□□□ 0.45
CTSB-213ENST00000527215 GLB1LQ6UWU2 654 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 MICAL1Q8TDZ2 1067 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 SNX29Q8TEQ0 813 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
CTSB-213ENST00000527215 PPP2R3CQ969Q6 453 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 PGBD4Q96DM1 585 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 CPB2Q96IY4 423 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 NFKBIZQ9BYH8 718 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 FAM50BQ9Y247 325 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
CTSB-213ENST00000527215 LRRIQ4A6NIV6 560 aa17.85■□□□□ 0.45
CTSB-213ENST00000527215 LINC01565O15544 149 aa17.85■□□□□ 0.45
CTSB-213ENST00000527215 OFD1O75665 1012 aa17.85■□□□□ 0.45
CTSB-213ENST00000527215 IL9P15248 144 aa17.85■□□□□ 0.45
CTSB-213ENST00000527215 AXLP30530 894 aa17.85■□□□□ 0.45
CTSB-213ENST00000527215 NRIP1P48552 1158 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms