RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 C9orf50Q5SZB4 431 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 TSHZ1Q6ZSZ6 1077 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 ZNF720Q7Z2F6 126 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 SFR1Q86XK3 245 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 ELOA2Q8IYF1 753 aaPredicted RBP11.91□□□□□ -0.5
NEDD8-205ENST00000527046 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 TMEM199Q8N511 208 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 ERCC4Q92889 916 aaPredicted RBP11.91□□□□□ -0.5
NEDD8-205ENST00000527046 PYM1Q9BRP8 204 aaKnown RBP11.91□□□□□ -0.5
NEDD8-205ENST00000527046 IKZF4Q9H2S9 585 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 MAGEF1Q9HAY2 307 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 DACT1Q9NYF0 836 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 CXXC1Q9P0U4 656 aaPredicted RBP11.91□□□□□ -0.5
NEDD8-205ENST00000527046 GINS2Q9Y248 185 aa11.91□□□□□ -0.5
NEDD8-205ENST00000527046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-205ENST00000527046 GOLGA6L4A6NEF3 574 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 ENPP3O14638 875 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 ABLIM1O14639 778 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 SLC16A4O15374 487 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 B4GALT5O43286 388 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-205ENST00000527046 TRAK2O60296 914 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 PARNO95453 639 aaKnown RBP11.9□□□□□ -0.5
NEDD8-205ENST00000527046 MAPTP10636 758 aaKnown RBP11.9□□□□□ -0.5
NEDD8-205ENST00000527046 BMP8BP34820 402 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 CASP5P51878 434 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 GTF2BQ00403 316 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 FPGSQ05932 587 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 KCNA1Q09470 495 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 PNOCQ13519 176 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 SHHQ15465 462 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 FAM187BQ17R55 369 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 ZC2HC1CQ53FD0 456 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-205ENST00000527046 UBXN11Q5T124 520 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 NT5DC1Q5TFE4 455 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 USP38Q8NB14 1042 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 CNNM3Q8NE01 707 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 DRC1Q96MC2 740 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
NEDD8-205ENST00000527046 GBP4Q96PP9 640 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 GCOM2Q9BZD3 368 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-205ENST00000527046 ST6GALNAC4Q9H4F1 302 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 TMEM134Q9H6X4 195 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
NEDD8-205ENST00000527046 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 LRRIQ4A6NIV6 560 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 TSPAN1O60635 241 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 RPS6KA5O75582 802 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 FAM189BP81408 668 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 STK4Q13043 487 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 COASYQ13057 564 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 PPIGQ13427 754 aaKnown RBP eCLIP11.89□□□□□ -0.51
NEDD8-205ENST00000527046 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 ODR4Q5SWX8 454 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.89□□□□□ -0.517e-16■■■□□ 19.1
NEDD8-205ENST00000527046 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 EPM2AIP1Q7L775 607 aaPredicted RBP11.89□□□□□ -0.51
NEDD8-205ENST00000527046 HAUS6Q7Z4H7 955 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 CEP57L1Q8IYX8 460 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 MYCT1Q8N699 235 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 IFIH1Q9BYX4 1025 aaKnown RBP11.89□□□□□ -0.51
NEDD8-205ENST00000527046 PARVGQ9HBI0 331 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 PTPRHQ9HD43 1115 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 OLFML3Q9NRN5 406 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 MICAL3Q7RTP6 2002 aa11.89□□□□□ -0.51
NEDD8-205ENST00000527046 TTC3P53804 2025 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 A0A1B0GUA9 196 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 CCDC169A6NNP5 214 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 C9IYK1 514 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 M0QZ92 97 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 ACKR2O00590 384 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 GPR182O15218 404 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 FAM13AO94988 1023 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 FGBP02675 491 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 ARF4P18085 180 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-205ENST00000527046 BMP6P22004 513 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 HOXD11P31277 338 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-205ENST00000527046 PHKA2P46019 1235 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 AMPD3Q01432 767 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 NFX1Q12986 1120 aaKnown RBP11.88□□□□□ -0.51
NEDD8-205ENST00000527046 TFDP1Q14186 410 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 POSTNQ15063 836 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 PPP2R5AQ15172 486 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-205ENST00000527046 SLC39A4Q6P5W5 647 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 CNKSR3Q6P9H4 555 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 RPUSD2Q8IZ73 545 aaKnown RBP11.88□□□□□ -0.51
NEDD8-205ENST00000527046 HERVK_113Q902F9 699 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 LRRC27Q9C0I9 530 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 HAPLN2Q9GZV7 340 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 KMT5AQ9NQR1 393 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 AGPAT5Q9NUQ2 364 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 TBC1D7Q9P0N9 293 aa11.88□□□□□ -0.51
NEDD8-205ENST00000527046 LARSQ9P2J5 1176 aaKnown RBP11.88□□□□□ -0.51
NEDD8-205ENST00000527046 COL4A6Q14031 1691 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms