RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 VPS36Q86VN1 386 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 LRRC4CQ9HCJ2 640 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 ZMYM2Q9UBW7 1377 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 ZNF536O15090 1300 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 GOLGA8KD6RF30 607 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 FGGP02679 453 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 RPS6P62753 249 aaKnown RBP12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 HS2ST1Q7LGA3 356 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 LRRC57Q8N9N7 239 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 SLC35G2Q8TBE7 412 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 SLC20A1Q8WUM9 679 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 LXNQ9BS40 222 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 GPRC5CQ9NQ84 441 aa12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 GREB1LQ9C091 1923 aaPredicted RBP12.98□□□□□ -0.33
CHMP1B-201ENST00000526991 SMIM23A6NLE4 172 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 NDUFAB1O14561 156 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 ATP9AO75110 1047 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 CALCAP01258 141 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 GCLMP48507 274 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 FMO5P49326 533 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 BTNL9Q6UXG8 535 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 KAT5Q92993 513 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 BORCS6Q96GS4 357 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 THAP2Q9H0W7 228 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 PLCB1Q9NQ66 1216 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 KCNH7Q9NS40 1196 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 ARHGEF35A5YM69 484 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 PGRMC1O00264 195 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 FOXN3O00409 490 aaPredicted RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 HIP1RO75146 1068 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 MOB2Q70IA6 237 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 ARMCX6Q7L4S7 300 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 IQCKQ8N0W5 287 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 CAVIN3Q969G5 261 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 SH3GL2Q99962 352 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 METTL14Q9HCE5 456 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 AGPAT3Q9NRZ7 376 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 GRIN2DO15399 1336 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 F8VZ95 297 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 K7ENM7 598 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 TBX3O15119 743 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 PPP1R12BO60237 982 aaPredicted RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 PSMD10O75832 226 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 TNIP1Q15025 636 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 PLA2G4FQ68DD2 849 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 PHLDB2Q86SQ0 1253 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 CPNE8Q86YQ8 564 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 ZC3H3Q8IXZ2 948 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 GLG1Q92896 1179 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 KIFC3Q9BVG8 833 aa12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 INTS2Q9H0H0 1204 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 UBE2TQ9NPD8 197 aaPredicted RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 PPANQ9NQ55 473 aaKnown RBP12.97□□□□□ -0.33
CHMP1B-201ENST00000526991 EIF3HO15372 352 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 DDNO94850 711 aaPredicted RBP12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 SOX5P35711 763 aa12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 NPEPPSP55786 919 aa12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 GLE1Q53GS7 698 aaKnown RBP12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 ODF2Q5BJF6 829 aa12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 PHLDB3Q6NSJ2 640 aa12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 ZNF720Q7Z2F6 126 aa12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 POLR3CQ9BUI4 534 aaPredicted RBP12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 PGAP2Q9UHJ9 254 aa12.96□□□□□ -0.33
CHMP1B-201ENST00000526991 EBAG9O00559 213 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 RPS6KA5O75582 802 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 TNFAIP3P21580 790 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 CIITAP33076 1130 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 HSD17B3P37058 310 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 JAM2P57087 298 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 MYL7Q01449 175 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 MOXD1Q6UVY6 613 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 CBWD1Q9BRT8 395 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 MTFR1LQ9H019 292 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 CXorf56Q9H5V9 222 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 FBXL5Q9UKA1 691 aa12.96□□□□□ -0.34
CHMP1B-201ENST00000526991 TMOD1P28289 359 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 CTNNA1P35221 906 aaKnown RBP12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 BAATQ14032 418 aaPredicted RBP12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 EEPD1Q7L9B9 569 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 FAM83AQ86UY5 434 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 NT5DC3Q86UY8 548 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 CTNNBL1Q8WYA6 563 aaPredicted RBP12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 BTBD6Q96KE9 485 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 BZW2Q9Y6E2 419 aaKnown RBP12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 NR1D1P20393 614 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 MARCKSL1P49006 195 aa12.95□□□□□ -0.34
CHMP1B-201ENST00000526991 MRPS9P82933 396 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms