RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 INO80B-WBP1J3KQ70 363 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 ERLIN2O94905 339 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
BEST1-205ENST00000526988 PBX3P40426 434 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 TOB1P50616 345 aaPredicted RBP18.06■□□□□ 0.48
BEST1-205ENST00000526988 RAB27AP51159 221 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 UBE3AQ05086 875 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 PTGDRQ13258 359 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 PTCRAQ6ISU1 281 aaPredicted RBP18.06■□□□□ 0.48
BEST1-205ENST00000526988 POTEGQ6S5H5 508 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 KCNT2Q6UVM3 1135 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 GLB1LQ6UWU2 654 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.06■□□□□ 0.48
BEST1-205ENST00000526988 TRAIPQ9BWF2 469 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 POLR3FQ9H1D9 316 aaPredicted RBP18.06■□□□□ 0.48
BEST1-205ENST00000526988 PUF60Q9UHX1 559 aaKnown RBP18.06■□□□□ 0.48
BEST1-205ENST00000526988 SMC3Q9UQE7 1217 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 INPP5FQ9Y2H2 1132 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 PCDHB6Q9Y5E3 794 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 PCDHB2Q9Y5E7 798 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 PCDHGC5Q9Y5F6 944 aa18.06■□□□□ 0.48
BEST1-205ENST00000526988 RPA1P27694 616 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 ARL2P36404 184 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 CCT6AP40227 531 aaKnown RBP18.05■□□□□ 0.48
BEST1-205ENST00000526988 PTENP60484 403 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 NCBP1Q09161 790 aaKnown RBP18.05■□□□□ 0.48
BEST1-205ENST00000526988 ADGRD2Q7Z7M1 963 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 RBM23Q86U06 439 aaKnown RBP18.05■□□□□ 0.48
BEST1-205ENST00000526988 PGBD4Q96DM1 585 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 MRPL9Q9BYD2 267 aaKnown RBP18.05■□□□□ 0.48
BEST1-205ENST00000526988 TLR9Q9NR96 1032 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 SPG21Q9NZD8 308 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 LRWD1Q9UFC0 647 aa18.05■□□□□ 0.48
BEST1-205ENST00000526988 DBR1Q9UK59 544 aaKnown RBP18.05■□□□□ 0.48
BEST1-205ENST00000526988 ARHGEF35A5YM69 484 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 LINC01565O15544 149 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 ZNF623O75123 536 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 GLRA2P23416 452 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 HOXA11P31270 313 aaPredicted RBP18.04■□□□□ 0.48
BEST1-205ENST00000526988 NRIP1P48552 1158 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 FXR2P51116 673 aaKnown RBP eCLIP18.04■□□□□ 0.48
BEST1-205ENST00000526988 ERVFC1P60507 584 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 KRT17Q04695 432 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 CAPSQ13938 189 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 COL19A1Q14993 1142 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 CLUL1Q15846 466 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 PUS10Q3MIT2 529 aaKnown RBP18.04■□□□□ 0.48
BEST1-205ENST00000526988 NOMO2Q5JPE7 1267 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 HAUS3Q68CZ6 603 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 TLE6Q9H808 572 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 GPRC5CQ9NQ84 441 aa18.04■□□□□ 0.48
BEST1-205ENST00000526988 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.04■□□□□ 0.48
BEST1-205ENST00000526988 LRRIQ4A6NIV6 560 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 MEIS3P2A8K0S8 358 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 PPM1AP35813 382 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 LTBRP36941 435 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 ALDH7A1P49419 539 aaKnown RBP18.03■□□□□ 0.48
BEST1-205ENST00000526988 BCAR1P56945 870 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 PLCB3Q01970 1234 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 RNASELQ05823 741 aaKnown RBP18.03■□□□□ 0.48
BEST1-205ENST00000526988 POU5F1BQ06416 359 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 CTC1Q2NKJ3 1217 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 PADI6Q6TGC4 694 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 MCPH1Q8NEM0 835 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 MRPS27Q92552 414 aaKnown RBP18.03■□□□□ 0.48
BEST1-205ENST00000526988 CPB2Q96IY4 423 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 RAB34Q9BZG1 259 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 REV3LO60673 3130 aa18.03■□□□□ 0.48
BEST1-205ENST00000526988 TCF20Q9UGU0 1960 aaKnown RBP18.02■□□□□ 0.48
BEST1-205ENST00000526988 GRXCR2A6NFK2 248 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 NT5C1B-RDH14C9J2C7 533 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 PER2O15055 1255 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 TSPAN1O60635 241 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 OFD1O75665 1012 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 IL9P15248 144 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 NDUFV1P49821 464 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 DLX2Q07687 328 aaPredicted RBP18.02■□□□□ 0.48
BEST1-205ENST00000526988 ADAM15Q13444 863 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 PDIA5Q14554 519 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 PCBP1Q15365 356 aaKnown RBP eCLIP18.02■□□□□ 0.48
BEST1-205ENST00000526988 UBXN11Q5T124 520 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 PLPP4Q5VZY2 271 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 PDE12Q6L8Q7 609 aaKnown RBP18.02■□□□□ 0.48
BEST1-205ENST00000526988 DTHD1Q6ZMT9 781 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 IFNLR1Q8IU57 520 aaPredicted RBP18.02■□□□□ 0.48
BEST1-205ENST00000526988 URGCPQ8TCY9 931 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 SNX29Q8TEQ0 813 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 TCF25Q9BQ70 676 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 GBP3Q9H0R5 595 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 ENTPD7Q9NQZ7 604 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 KIAA1024Q9UPX6 916 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 FAM50BQ9Y247 325 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 LZTS1Q9Y250 596 aa18.02■□□□□ 0.48
BEST1-205ENST00000526988 VCANP13611 3396 aa18.02■□□□□ 0.47
BEST1-205ENST00000526988 MYO7AQ13402 2215 aa18.02■□□□□ 0.47
BEST1-205ENST00000526988 FNDC1Q4ZHG4 1894 aaPredicted RBP18.01■□□□□ 0.47
BEST1-205ENST00000526988 LAD1O00515 517 aa18.01■□□□□ 0.47
BEST1-205ENST00000526988 ZC3H11AO75152 810 aaKnown RBP eCLIP18.01■□□□□ 0.47
BEST1-205ENST00000526988 CYP11B2P19099 503 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms