RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 GGA2Q9UJY4 613 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 NOVA2Q9UNW9 492 aaKnown RBP12.62□□□□□ -0.39
LINC01001-201ENST00000526704 DAAM1Q9Y4D1 1078 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 CAPN7Q9Y6W3 813 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 AFF2P51816 1311 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 FOXN3O00409 490 aaPredicted RBP12.62□□□□□ -0.39
LINC01001-201ENST00000526704 TRAPPC3O43617 180 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 HIP1RO75146 1068 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 PAEPP09466 180 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 CCDC172P0C7W6 258 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 ARP10275 920 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 VCAM1P19320 739 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 GUCY2CP25092 1073 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 PDE6BP35913 854 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 KRT71Q3SY84 523 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 C6orf89Q6UWU4 347 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 B3GNT9Q6UX72 402 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 SLC9A9Q8IVB4 645 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 FMNL3Q8IVF7 1028 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 PRPF38AQ8NAV1 312 aaKnown RBP12.62□□□□□ -0.39
LINC01001-201ENST00000526704 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 AGPAT1Q99943 283 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 LXNQ9BS40 222 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
LINC01001-201ENST00000526704 EXOC3O60645 756 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 ENTPD3O75355 529 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 VIL1P09327 827 aaKnown RBP12.61□□□□□ -0.39
LINC01001-201ENST00000526704 CHRM1P11229 460 aaPredicted RBP12.61□□□□□ -0.39
LINC01001-201ENST00000526704 RFX1P22670 979 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
LINC01001-201ENST00000526704 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
LINC01001-201ENST00000526704 DLG4P78352 724 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 SPDYCQ5MJ68 293 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 AADACL2Q6P093 401 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
LINC01001-201ENST00000526704 HOOK2Q96ED9 719 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 ERP44Q9BS26 406 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 ZNF577Q9BSK1 485 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 SYNPO2Q9UMS6 1093 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 ATP8A1Q9Y2Q0 1164 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 GOLGA6L10A0A0M3HER8 536 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 GMNCA6NCL1 334 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 QPCTQ16769 361 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 ARHGEF19Q8IW93 802 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 RDH13Q8NBN7 331 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 GLG1Q92896 1179 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 TLCD1Q96CP7 247 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 NAP1L3Q99457 506 aaPredicted RBP12.61□□□□□ -0.39
LINC01001-201ENST00000526704 WDR11Q9BZH6 1224 aa12.61□□□□□ -0.39
LINC01001-201ENST00000526704 RANBP17Q9H2T7 1088 aaKnown RBP12.61□□□□□ -0.39
LINC01001-201ENST00000526704 EMSYQ7Z589 1322 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 TISP43B9A030 160 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 K7ENM7 598 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 TRIM37O94972 964 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 HNRNPH1P31943 449 aaKnown RBP12.6□□□□□ -0.39
LINC01001-201ENST00000526704 MARCKSL1P49006 195 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 PPP2R5EQ16537 467 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 ODF2Q5BJF6 829 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 C11orf63Q6NUN7 778 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 JAMLQ86YT9 394 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 RHOT2Q8IXI1 618 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 SYCP3Q8IZU3 236 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 NLGN1Q8N2Q7 840 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 C3orf20Q8ND61 904 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 RAPGEF5Q92565 580 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 ZNF622Q969S3 477 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC01001-201ENST00000526704 SYNGAP1Q96PV0 1343 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 ARHGEF35A5YM69 484 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 FAM187AA6NFU0 413 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 SETQ01105 290 aaPredicted RBP12.6□□□□□ -0.39
LINC01001-201ENST00000526704 IFT88Q13099 833 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 DHX34Q14147 1143 aaKnown RBP12.6□□□□□ -0.39
LINC01001-201ENST00000526704 ZDHHC24Q6UX98 284 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 COL23A1Q86Y22 540 aaPredicted RBP12.6□□□□□ -0.39
LINC01001-201ENST00000526704 KRT35Q92764 455 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 PSMD1Q99460 953 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 TEKT3Q9BXF9 490 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
LINC01001-201ENST00000526704 ALG6Q9Y672 507 aa12.6□□□□□ -0.39
LINC01001-201ENST00000526704 C5orf60A6NFR6 353 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 KIAA0391O15091 583 aaKnown RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 PHF2O75151 1096 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 SHBGP04278 402 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 PTGIRP43119 386 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 PPP3CAQ08209 521 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 TRAF1Q13077 416 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 MYBPC2Q14324 1141 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 TCEAL1Q15170 157 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 EPC2Q52LR7 807 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 C1orf220Q5T0J3 134 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 MEX3CQ5U5Q3 659 aaKnown RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 C18orf8Q96DM3 657 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 PRMT6Q96LA8 375 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms