RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 CTC1Q2NKJ3 1217 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 XKR9Q5GH70 373 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 ARL6IP4Q66PJ3 421 aaKnown RBP11.66□□□□□ -0.54
RBBP4-216ENST00000525506 MCTP1Q6DN14 999 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 ZNF598Q86UK7 904 aaKnown RBP11.66□□□□□ -0.54
RBBP4-216ENST00000525506 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 THNSL1Q8IYQ7 743 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 KCTD17Q8N5Z5 321 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 HELQQ8TDG4 1101 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 LPPQ93052 612 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 RAPGEFL1Q9UHV5 662 aa11.66□□□□□ -0.54
RBBP4-216ENST00000525506 A0A0U1RQF3 1178 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 POTEMA6NI47 508 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 MEIS3P2A8K0S8 358 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 PER2O15055 1255 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 NRIP1P48552 1158 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 ERVFC1P60507 584 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 RBM10P98175 930 aaKnown RBP11.65□□□□□ -0.54
RBBP4-216ENST00000525506 ATP2C1P98194 919 aaPredicted RBP11.65□□□□□ -0.54
RBBP4-216ENST00000525506 PTGDRQ13258 359 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 EMC2Q15006 297 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 TWF2Q6IBS0 349 aaKnown RBP11.65□□□□□ -0.54
RBBP4-216ENST00000525506 CATSPER4Q7RTX7 472 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 FAM178BQ8IXR5 827 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 ABI1Q8IZP0 508 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 MICAL1Q8TDZ2 1067 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 PRPF31Q8WWY3 499 aaKnown RBP11.65□□□□□ -0.54
RBBP4-216ENST00000525506 MINDY3Q9H8M7 445 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 AAASQ9NRG9 546 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 DBR1Q9UK59 544 aaKnown RBP11.65□□□□□ -0.54
RBBP4-216ENST00000525506 PIN4Q9Y237 131 aaKnown RBP11.65□□□□□ -0.54
RBBP4-216ENST00000525506 PCDHB6Q9Y5E3 794 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 COL4A3BPQ9Y5P4 624 aa11.65□□□□□ -0.54
RBBP4-216ENST00000525506 SLC26A4O43511 780 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 DGAT1O75907 488 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 SPATA31C1P0DKV0 1188 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 LAG3P18627 525 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 SFPQP23246 707 aaKnown RBP eCLIP11.64□□□□□ -0.55
RBBP4-216ENST00000525506 TECP42680 631 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 PHKA2P46019 1235 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 LAMTOR4Q0VGL1 99 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 ADAM15Q13444 863 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 PCBP1Q15365 356 aaKnown RBP eCLIP11.64□□□□□ -0.55
RBBP4-216ENST00000525506 KCNT2Q6UVM3 1135 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 PIGOQ8TEQ8 1089 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 NACC1Q96RE7 527 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 INO80BQ9C086 356 aaPredicted RBP11.64□□□□□ -0.55
RBBP4-216ENST00000525506 TLE6Q9H808 572 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 XPNPEP1Q9NQW7 623 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 TLR9Q9NR96 1032 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 DACT1Q9NYF0 836 aa11.64□□□□□ -0.55
RBBP4-216ENST00000525506 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
RBBP4-216ENST00000525506 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
RBBP4-216ENST00000525506 NT5C1B-RDH14C9J2C7 533 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 ASAP2O43150 1006 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 HOXA2O43364 376 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 NCK2O43639 380 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 GLP2RO95838 553 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 EOMESO95936 686 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 SYT1P21579 422 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 SSTR3P32745 418 aaPredicted RBP11.63□□□□□ -0.55
RBBP4-216ENST00000525506 RARRES1P49788 294 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 NDUFV1P49821 464 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 POU5F1BQ06416 359 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 MXD4Q14582 209 aaPredicted RBP11.63□□□□□ -0.55
RBBP4-216ENST00000525506 NBR1Q14596 966 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 PLPP4Q5VZY2 271 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 DTHD1Q6ZMT9 781 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 RNF149Q8NC42 400 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 VN1R2Q8NFZ6 395 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
RBBP4-216ENST00000525506 RSPH1Q8WYR4 309 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 AK8Q96MA6 479 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 MTRQ99707 1265 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 CHST12Q9NRB3 414 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 FAM105AQ9NUU6 356 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 CLEC1BQ9P126 229 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
RBBP4-216ENST00000525506 LRWD1Q9UFC0 647 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 BARX2Q9UMQ3 279 aaPredicted RBP11.63□□□□□ -0.55
RBBP4-216ENST00000525506 INPP5FQ9Y2H2 1132 aa11.63□□□□□ -0.55
RBBP4-216ENST00000525506 FAM86C2PA6NEL3 165 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 FSCN2O14926 492 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 MBTPS2O43462 519 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 COL9A1P20849 921 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 UBE3AQ05086 875 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 PUS10Q3MIT2 529 aaKnown RBP11.62□□□□□ -0.55
RBBP4-216ENST00000525506 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 GJD3Q8N144 294 aa11.62□□□□□ -0.55
RBBP4-216ENST00000525506 EFHBQ8N7U6 833 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms