RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 MYL1P05976 194 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 PFKFB1P16118 471 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 ATP2A2P16615 1042 aaKnown RBP13.67□□□□□ -0.22
CCS-202ENST00000525435 SYKP43405 635 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 NPTX2P47972 431 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
CCS-202ENST00000525435 FAM189BP81408 668 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 SMAD3P84022 425 aaKnown RBP13.67□□□□□ -0.22
CCS-202ENST00000525435 DHX8Q14562 1220 aaKnown RBP13.67□□□□□ -0.22
CCS-202ENST00000525435 MAPK6Q16659 721 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 PPP4R3CPQ6ZMV5 832 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 SLC24A5Q71RS6 500 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 CATSPER4Q7RTX7 472 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 RTN4RL1Q86UN2 441 aaPredicted RBP13.67□□□□□ -0.22
CCS-202ENST00000525435 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 BSNDQ8WZ55 320 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 DDX12PQ92771 950 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 TOP1MTQ969P6 601 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 DHX58Q96C10 678 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 CCDC51Q96ER9 411 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 CCDC34Q96HJ3 373 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 ZNF668Q96K58 619 aaPredicted RBP13.67□□□□□ -0.22
CCS-202ENST00000525435 REEP2Q9BRK0 252 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 FZD8Q9H461 694 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 TMEM134Q9H6X4 195 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 PARVGQ9HBI0 331 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 PRMT7Q9NVM4 692 aaPredicted RBP13.67□□□□□ -0.22
CCS-202ENST00000525435 SEL1LQ9UBV2 794 aa13.67□□□□□ -0.22
CCS-202ENST00000525435 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 A0A1B0GVL5 298 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.66□□□□□ -0.22
CCS-202ENST00000525435 DENND3A2RUS2 1198 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 MYMKA6NI61 221 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 CCDC169A6NNP5 214 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 INO80B-WBP1J3KQ70 363 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 K7ERI5 159 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 TBCAO75347 108 aaKnown RBP13.66□□□□□ -0.22
CCS-202ENST00000525435 ERLIN2O94905 339 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 FAM13AO94988 1023 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
CCS-202ENST00000525435 SKIP12755 728 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 GAP43P17677 238 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 HOXA11P31270 313 aaPredicted RBP13.66□□□□□ -0.22
CCS-202ENST00000525435 PEX3P56589 373 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 MBTD1Q05BQ5 628 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 TCTN1Q2MV58 587 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 FSIP1Q8NA03 581 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 DNAJC19Q96DA6 116 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 ADAM2Q99965 735 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 C7orf25Q9BPX7 421 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 ELAC1Q9H777 363 aaKnown RBP13.66□□□□□ -0.22
CCS-202ENST00000525435 MINDY3Q9H8M7 445 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 KMT5AQ9NQR1 393 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 ARHGAP28Q9P2N2 729 aa13.66□□□□□ -0.22
CCS-202ENST00000525435 A0A0U1RQF3 1178 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 A0A1B0GUA9 196 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 FRMD3A2A2Y4 597 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 SFI1A8K8P3 1242 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 C9IYK1 514 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 ACKR2O00590 384 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 ZNF623O75123 536 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 CSDE1O75534 798 aaKnown RBP13.65□□□□□ -0.22
CCS-202ENST00000525435 EOMESO95936 686 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 STAG3L1P0CL83 205 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
CCS-202ENST00000525435 NDUFA8P51970 172 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 NOTUMQ6P988 496 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 HERC6Q8IVU3 1022 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 CRIPAKQ8N1N5 446 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 POLD4Q9HCU8 107 aa13.65□□□□□ -0.22
CCS-202ENST00000525435 MYH15Q9Y2K3 1946 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 TANC1Q9C0D5 1861 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 PVALEFA0A1B0GWK0 134 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 ACTN4O43707 911 aaKnown RBP13.64□□□□□ -0.23
CCS-202ENST00000525435 TRAK2O60296 914 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 ZNF202O95125 648 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 GJB5O95377 273 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 RAB27AP51159 221 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 RAB30Q15771 203 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 AMHR2Q16671 573 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 GPR153Q6NV75 609 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCS-202ENST00000525435 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 CCDC65Q8IXS2 484 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 TMEM161BQ8NDZ6 487 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 CNNM3Q8NE01 707 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 RAD9AQ99638 391 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 TRIM9Q9C026 710 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 OLFML3Q9NRN5 406 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 PIN4Q9Y237 131 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms