RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 SUCLA2Q9P2R7 463 aaPredicted RBP10.81□□□□□ -0.68
CNKSR1-209ENST00000524529 ORC3Q9UBD5 711 aaPredicted RBP10.81□□□□□ -0.68
CNKSR1-209ENST00000524529 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.81□□□□□ -0.68
CNKSR1-209ENST00000524529 C2orf16Q68DN1 1984 aa10.81□□□□□ -0.68
CNKSR1-209ENST00000524529 CACNA1HO95180 2353 aa10.81□□□□□ -0.68
CNKSR1-209ENST00000524529 TDRD15B5MCY1 1934 aaKnown RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 K7ELQ4 463 aaPredicted RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 HOXA2O43364 376 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 EOMESO95936 686 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 AFF1P51825 1210 aaKnown RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 BCAR1P56945 870 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 NR5A1Q13285 461 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 PDE12Q6L8Q7 609 aaKnown RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 ANKRD54Q6NXT1 300 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 LLGL2Q6P1M3 1020 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 PIK3AP1Q6ZUJ8 805 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 NEK8Q86SG6 692 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 ALYREFQ86V81 257 aaKnown RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 HSCBQ8IWL3 235 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 INTS4Q96HW7 963 aaKnown RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 NLRP4Q96MN2 994 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 TRAIPQ9BWF2 469 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 APOL5Q9BWW9 433 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 PHF7Q9BWX1 381 aaPredicted RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 MINDY3Q9H8M7 445 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 ENTPD7Q9NQZ7 604 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 BMP2KQ9NSY1 1161 aaPredicted RBP10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 SPG21Q9NZD8 308 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 RGL1Q9NZL6 768 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 DENND4AQ7Z401 1863 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 DOCK6Q96HP0 2047 aa10.8□□□□□ -0.68
CNKSR1-209ENST00000524529 CCDC194A0A1B0GVG4 234 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 C2orf71A6NGG8 1288 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 CCNT1O60563 726 aaKnown RBP10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 OFD1O75665 1012 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 TECP42680 631 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 QARSP47897 775 aaKnown RBP10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 FOSBP53539 338 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 AGMOQ6ZNB7 445 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 TMC7Q7Z402 723 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 ZNF410Q86VK4 478 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 ABI1Q8IZP0 508 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 MRPL43Q8N983 215 aaKnown RBP10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 EDAQ92838 391 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 TMEM143Q96AN5 459 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 RPGRIP1Q96KN7 1286 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 FAM20AQ96MK3 541 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 VN1R3Q9BXE9 311 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 NRDE2Q9H7Z3 1164 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 NGRNQ9NPE2 291 aaKnown RBP10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 CHST12Q9NRB3 414 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 FAM105AQ9NUU6 356 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 PIN4Q9Y237 131 aaKnown RBP10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 HCFC2Q9Y5Z7 792 aa10.79□□□□□ -0.68
CNKSR1-209ENST00000524529 PLXNA3P51805 1871 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 TRIP11Q15643 1979 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 CLASP2O75122 1294 aaKnown RBP10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 ZNF623O75123 536 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 P4HBP07237 508 aaKnown RBP10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 GALTP07902 379 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 HOXA11P31270 313 aaPredicted RBP10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 PPM1AP35813 382 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 CTTNQ14247 550 aaKnown RBP10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 BECN1Q14457 450 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 EPHA7Q15375 998 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 TWF2Q6IBS0 349 aaKnown RBP10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 KANK3Q6NY19 840 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 ZNF280BQ86YH2 543 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 C4orf19Q8IY42 314 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 FAM184AQ8NB25 1140 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 AUTS2Q8WXX7 1259 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 DYDC2Q96IM9 177 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 CEP170P1Q96L14 293 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 FBXL18Q96ME1 805 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 LXNQ9BS40 222 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 ZBP1Q9H171 429 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 AGPAT5Q9NUQ2 364 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 TBC1D13Q9NVG8 400 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 DNAJB4Q9UDY4 337 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 PUF60Q9UHX1 559 aaKnown RBP10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 COL4A3BPQ9Y5P4 624 aa10.78□□□□□ -0.68
CNKSR1-209ENST00000524529 DOCK8Q8NF50 2099 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 TBX3O15119 743 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 ZC3H11AO75152 810 aaKnown RBP eCLIP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 DDHD2O94830 711 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 PDIA4P13667 645 aaKnown RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 GCFC2P16383 781 aaKnown RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 SFPQP23246 707 aaKnown RBP eCLIP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 SP100P23497 879 aaPredicted RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 YWHABP31946 246 aaKnown RBP10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 SLC11A1P49279 550 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 MRE11P49959 708 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 DNM2P50570 870 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 ZXDAP98168 799 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 CDC42EP1Q00587 391 aa10.77□□□□□ -0.69
CNKSR1-209ENST00000524529 CYP4A11Q02928 519 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms