RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 RNF181Q9P0P0 153 aa8.3□□□□□ -1.08
CTR9-202ENST00000524523 KCNH4Q9UQ05 1017 aa8.3□□□□□ -1.08
CTR9-202ENST00000524523 LUC7L2Q9Y383 392 aaKnown RBP8.3□□□□□ -1.08
CTR9-202ENST00000524523 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
CTR9-202ENST00000524523 DICER1Q9UPY3 1922 aaKnown RBP8.3□□□□□ -1.08
CTR9-202ENST00000524523 ASTN2O75129 1339 aaPredicted RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 MYH7BA7E2Y1 1941 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 A0A0G2JLL6 359 aaPredicted RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 WDR64B1ANS9 1081 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 EML1O00423 815 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 DYNC1I1O14576 645 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 CETN3O15182 167 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 SLC16A3O15427 465 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 CALUO43852 315 aaPredicted RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 DDNO94850 711 aaPredicted RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 GYPCP04921 128 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 ARP10275 920 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 TNNT1P13805 278 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 ICAM3P32942 547 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 HMGCS2P54868 508 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 PSMC5P62195 406 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 ETF1P62495 437 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 MRPS9P82933 396 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 ZBED6P86452 979 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 RBL2Q08999 1139 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 SYCP1Q15431 976 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 MEA1Q16626 185 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 ARHGEF16Q5VV41 709 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 KCNV1Q6PIU1 500 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 LRRC55Q6ZSA7 311 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 OTUD6AQ7L8S5 288 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 PRRT2Q7Z6L0 340 aaPredicted RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 RIOX2Q8IUF8 465 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 CPXCR1Q8N123 301 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 MYRIPQ8NFW9 859 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 ATG4CQ96DT6 458 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 CNOT6LQ96LI5 555 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 MPHOSPH6Q99547 160 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 NOC4LQ9BVI4 516 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 VPS16Q9H269 839 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 BHMT2Q9H2M3 363 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 UNC45AQ9H3U1 944 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 PARVGQ9HBI0 331 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 RNF146Q9NTX7 359 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 TYW1Q9NV66 732 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 LARSQ9P2J5 1176 aaKnown RBP8.29□□□□□ -1.08
CTR9-202ENST00000524523 MYO1AQ9UBC5 1043 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 MYO6Q9UM54 1294 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 PHF24Q9UPV7 400 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 MAPK8IP1Q9UQF2 711 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 PPME1Q9Y570 386 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 SNCAIPQ9Y6H5 919 aa8.29□□□□□ -1.08
CTR9-202ENST00000524523 GTPBP10A4D1E9 387 aaKnown RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 GLTPD2A6NH11 291 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 MAPK13O15264 365 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 EIF3JO75822 258 aaKnown RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 CCDC175P0C221 793 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 CASP14P31944 242 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 MTIF2P46199 727 aaKnown RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 RTP1P59025 263 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 PSMC6P62333 389 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 FKBP1BP68106 108 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 SRSF11Q05519 484 aaKnown RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 ENPEPQ07075 957 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 PTK7Q13308 1070 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 PPIL2Q13356 520 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 ADAM9Q13443 819 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 BAATQ14032 418 aaPredicted RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 VGLL4Q14135 290 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 GAS6Q14393 721 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TMEM132BQ14DG7 1078 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TEAD4Q15561 434 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 ARSJQ5FYB0 599 aaPredicted RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 MUM1L1Q5H9M0 696 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 MIIPQ5JXC2 388 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 C9orf131Q5VYM1 1079 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 CEP135Q66GS9 1140 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 ZNF720Q7Z2F6 126 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 ARMC9Q7Z3E5 817 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 MIER3Q7Z3K6 550 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TRIM59Q8IWR1 403 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TPH2Q8IWU9 490 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TXLNBQ8N3L3 684 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 SCFD1Q8WVM8 642 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 DYDC2Q96IM9 177 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TAAR1Q96RJ0 339 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 REEP2Q9BRK0 252 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 NTPCRQ9BSD7 190 aaKnown RBP8.28□□□□□ -1.08
CTR9-202ENST00000524523 STRA6Q9BX79 667 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 TTYH3Q9C0H2 523 aa8.28□□□□□ -1.08
CTR9-202ENST00000524523 CYP39A1Q9NYL5 469 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms