RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 YDJCA8MPS7 323 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 K7ENM7 598 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 PLA2G6O60733 806 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 BCRP11274 1271 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 KRT13P13646 458 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 SEC24CP53992 1094 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 DLG4P78352 724 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 DHX9Q08211 1270 aaKnown RBP11.99□□□□□ -0.49
HDAC9-228ENST00000524023 AGBL2Q5U5Z8 902 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 PADI6Q6TGC4 694 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 NEK9Q8TD19 979 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 ATP8B4Q8TF62 1192 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 ZNF473Q8WTR7 871 aaKnown RBP11.99□□□□□ -0.49
HDAC9-228ENST00000524023 SLC20A1Q8WUM9 679 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
HDAC9-228ENST00000524023 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 RIT2Q99578 217 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 MXRA8Q9BRK3 442 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 VCPKMTQ9H867 229 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 TMOD2Q9NZR1 351 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 EMSYQ7Z589 1322 aa11.99□□□□□ -0.49
HDAC9-228ENST00000524023 DDX39AO00148 427 aaKnown RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ERLIN2O94905 339 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 HADHBP55084 474 aaKnown RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ZYXQ15942 572 aaKnown RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 PPP2R5EQ16537 467 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 SAMD1Q6SPF0 538 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 INTS8Q75QN2 995 aaKnown RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 LDHDQ86WU2 507 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 RHOT2Q8IXI1 618 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 MYCBPAPQ8TBZ2 947 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 RAB17Q9H0T7 212 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 PCIF1Q9H4Z3 704 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ERVK-5Q9HDB9 667 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 UBE2TQ9NPD8 197 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 SLC12A6Q9UHW9 1150 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 GOLGA6L10A0A0M3HER8 536 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 CLRN2A0PK11 232 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 TISP43B9A030 160 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ITGB5P18084 799 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 INPP5BP32019 993 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 DR1Q01658 176 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ZNF211Q13398 564 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 DUPD1Q68J44 220 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 MAEAQ7L5Y9 396 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 MIER3Q7Z3K6 550 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ADAT2Q7Z6V5 191 aaKnown RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ARHGEF19Q8IW93 802 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 TMEM174Q8WUU8 243 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 C7orf43Q8WVR3 580 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 FAM151AQ8WW52 585 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ALG3Q92685 438 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ERP44Q9BS26 406 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 TXLNGYQ9BZA5 131 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 TRIM31Q9BZY9 425 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 TMEM206Q9H813 350 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 EFCC1Q9HA90 598 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 BCCIPQ9P287 314 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 LARSQ9P2J5 1176 aaKnown RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-228ENST00000524023 BCS1LQ9Y276 419 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
HDAC9-228ENST00000524023 E7EVH7 732 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 P4HA2O15460 535 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 PPFIA2O75334 1257 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 FAM107AO95990 144 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 FTLP02792 175 aaPredicted RBP11.97□□□□□ -0.49
HDAC9-228ENST00000524023 P4HBP07237 508 aaKnown RBP11.97□□□□□ -0.49
HDAC9-228ENST00000524023 MAPTP10636 758 aaKnown RBP11.97□□□□□ -0.49
HDAC9-228ENST00000524023 VCAM1P19320 739 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 CHRNA5P30532 468 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 COPB2P35606 906 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 VAMP7P51809 220 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 PPP3CAQ08209 521 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 CETN1Q12798 172 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 TCEAL1Q15170 157 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 CLUL1Q15846 466 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 EPC2Q52LR7 807 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 SPDYCQ5MJ68 293 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 C12orf56Q8IXR9 622 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 ACCSQ96QU6 501 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 FMO2Q99518 471 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 DEFB129Q9H1M3 183 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 TMOD4Q9NZQ9 345 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 FEM1BQ9UK73 627 aa11.97□□□□□ -0.49
HDAC9-228ENST00000524023 FAM187AA6NFU0 413 aa11.96□□□□□ -0.49
HDAC9-228ENST00000524023 PLSCR1O15162 318 aa11.96□□□□□ -0.49
HDAC9-228ENST00000524023 MEFVO15553 781 aaPredicted RBP11.96□□□□□ -0.49
HDAC9-228ENST00000524023 HSD17B4P51659 736 aa11.96□□□□□ -0.49
HDAC9-228ENST00000524023 PPP2R2AP63151 447 aa11.96□□□□□ -0.49
HDAC9-228ENST00000524023 ALCAMQ13740 583 aa11.96□□□□□ -0.49
HDAC9-228ENST00000524023 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
HDAC9-228ENST00000524023 ODF2Q5BJF6 829 aa11.96□□□□□ -0.49
HDAC9-228ENST00000524023 C1orf220Q5T0J3 134 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms