RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 SLC12A3P55017 1021 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
CCNC-216ENST00000523961 NCBP1Q09161 790 aaKnown RBP13.86□□□□□ -0.19
CCNC-216ENST00000523961 USP49Q70CQ1 688 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 ZBTB8OSQ8IWT0 167 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 DRC1Q96MC2 740 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 AGPAT5Q9NUQ2 364 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 TMEM161AQ9NX61 479 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 LAMA2P24043 3122 aaKnown RBP13.86□□□□□ -0.19
CCNC-216ENST00000523961 MYH15Q9Y2K3 1946 aa13.86□□□□□ -0.19
CCNC-216ENST00000523961 A0A0U1RQF3 1178 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 LINC01553A4QN01 128 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 CUTAO60888 179 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 HIP1RO75146 1068 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 ARHGEF15O94989 841 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 SKIP12755 728 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 AXLP30530 894 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 MBTD1Q05BQ5 628 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 GRIN2CQ14957 1233 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 RRAGBQ5VZM2 374 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 CDCA2Q69YH5 1023 aaPredicted RBP13.85□□□□□ -0.19
CCNC-216ENST00000523961 TWF2Q6IBS0 349 aaKnown RBP13.85□□□□□ -0.19
CCNC-216ENST00000523961 ECHDC2Q86YB7 292 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 DEPTORQ8TB45 409 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 BSNDQ8WZ55 320 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 LARP4BQ92615 738 aaKnown RBP13.85□□□□□ -0.19
CCNC-216ENST00000523961 RAD54LQ92698 747 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
CCNC-216ENST00000523961 C17orf75Q9HAS0 396 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 RC3H2Q9HBD1 1191 aaKnown RBP13.85□□□□□ -0.19
CCNC-216ENST00000523961 POLD4Q9HCU8 107 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 BLOC1S4Q9NUP1 217 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 STK17AQ9UEE5 414 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 ADGRA3Q8IWK6 1321 aa13.85□□□□□ -0.19
CCNC-216ENST00000523961 HOXA2O43364 376 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 TSPAN1O60635 241 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 EOMESO95936 686 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 HOXA11P31270 313 aaPredicted RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 DDIT3P35638 169 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 RAB27AP51159 221 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 EFNA5P52803 228 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 ERVK-21P61565 698 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 KRT85P78386 507 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 NUCB2P80303 420 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 MAPK7Q13164 816 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 DMP1Q13316 513 aaPredicted RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 BTG3Q14201 252 aaPredicted RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 DHX8Q14562 1220 aaKnown RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 MCM6Q14566 821 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 CCDC73Q6ZRK6 1079 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 GPBP1Q86WP2 473 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 DAW1Q8N136 415 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 FIBCD1Q8N539 461 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 CCDC51Q96ER9 411 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 PRIMPOLQ96LW4 560 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 GUCD1Q96NT3 240 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 SAMD11Q96NU1 681 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 TGS1Q96RS0 853 aaKnown RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 CDX2Q99626 313 aaPredicted RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 PRMT7Q9NVM4 692 aaPredicted RBP13.84□□□□□ -0.19
CCNC-216ENST00000523961 KCNG1Q9UIX4 513 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 RCOR1Q9UKL0 485 aa13.84□□□□□ -0.19
CCNC-216ENST00000523961 COL4A6Q14031 1691 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 ZNF623O75123 536 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 NCLP19338 710 aaKnown RBP13.83□□□□□ -0.2
CCNC-216ENST00000523961 ME1P48163 572 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 PEX3P56589 373 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 RAD51AP2Q09MP3 1159 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 MAPK6Q16659 721 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 AMHR2Q16671 573 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 FAM187BQ17R55 369 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 NOTUMQ6P988 496 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 LRRC15Q8TF66 581 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 FZD8Q9H461 694 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 PRDM12Q9H4Q4 367 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 ODF2LQ9ULJ1 636 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 PHLPP2Q6ZVD8 1323 aa13.83□□□□□ -0.2
CCNC-216ENST00000523961 CCDC169A6NNP5 214 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 PRKCBP05771 671 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 KRT18P05783 430 aaKnown RBP13.82□□□□□ -0.2
CCNC-216ENST00000523961 PLS3P13797 630 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 ARF4P18085 180 aaPredicted RBP13.82□□□□□ -0.2
CCNC-216ENST00000523961 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
CCNC-216ENST00000523961 STAT6P42226 847 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 NPTX2P47972 431 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 ARSHQ5FYA8 562 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 AXDND1Q5T1B0 1012 aaPredicted RBP13.82□□□□□ -0.2
CCNC-216ENST00000523961 SV2BQ7L1I2 683 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 ZNF598Q86UK7 904 aaKnown RBP13.82□□□□□ -0.2
CCNC-216ENST00000523961 ABI1Q8IZP0 508 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 RNF169Q8NCN4 708 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 CNNM3Q8NE01 707 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 MYLIPQ8WY64 445 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 ARNTL2Q8WYA1 636 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
CCNC-216ENST00000523961 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms