RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 MTMR1Q13613 665 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 SAFB2Q14151 953 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 FAM50AQ14320 339 aaKnown RBP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 INAVAQ3KP66 663 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 KCNK18Q7Z418 384 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 TAX1BP1Q86VP1 789 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 RPUSD2Q8IZ73 545 aaKnown RBP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 CBARPQ8N350 705 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 PIK3C3Q8NEB9 887 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 RABGGTAQ92696 567 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 GCDHQ92947 438 aaPredicted RBP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 RAX2Q96IS3 184 aa7.47□□□□□ -1.21
CPNE3-207ENST00000523588 AGO3Q9H9G7 860 aaKnown RBP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 CNOT11Q9UKZ1 510 aaKnown RBP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 NOP58Q9Y2X3 529 aaKnown RBP7.47□□□□□ -1.21
CPNE3-207ENST00000523588 DAPK3O43293 454 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 NRP2O60462 931 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 MRPS9P82933 396 aaKnown RBP7.46□□□□□ -1.22
CPNE3-207ENST00000523588 KLF1Q13351 362 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-207ENST00000523588 TCTN3Q6NUS6 607 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 CIR1Q86X95 450 aaPredicted RBP7.46□□□□□ -1.22
CPNE3-207ENST00000523588 GPR135Q8IZ08 494 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 UNC5BQ8IZJ1 945 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 DNERQ8NFT8 737 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 GPHA2Q96T91 129 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 C12orf65Q9H3J6 166 aaKnown RBP7.46□□□□□ -1.22
CPNE3-207ENST00000523588 WASHC2CQ9Y4E1 1318 aa7.46□□□□□ -1.22
CPNE3-207ENST00000523588 A0A1W2PR48 441 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 ALG1L2C9J202 215 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 CDC14BO60729 498 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 KATNA1O75449 491 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 XPAP23025 273 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-207ENST00000523588 KIR2DL3P43628 341 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 BPIFB4P59827 614 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 MGAT5Q09328 741 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 QRSL1Q9H0R6 528 aaKnown RBP7.45□□□□□ -1.22
CPNE3-207ENST00000523588 CCDC8Q9H0W5 538 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-207ENST00000523588 MSL2Q9HCI7 577 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 CCM2LQ9NUG4 571 aaPredicted RBP7.45□□□□□ -1.22
CPNE3-207ENST00000523588 DPP7Q9UHL4 492 aa7.45□□□□□ -1.22
CPNE3-207ENST00000523588 PATE3B3GLJ2 98 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 FOXS1O43638 330 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 TOX4O94842 621 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 VSIG10L2P0DP72 767 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 IBSPP21815 317 aaPredicted RBP7.44□□□□□ -1.22
CPNE3-207ENST00000523588 SPIDRQ14159 915 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 ICAM4Q14773 271 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 GAGE13Q4V321 117 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 TOR2AQ5JU69 321 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 ERICH6BQ5W0A0 696 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 ADGRE4PQ86SQ3 457 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 ANKRD53Q8N9V6 530 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 SHCBP1Q8NEM2 672 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 TSPEARQ8WU66 669 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 RPL10LQ96L21 214 aaKnown RBP7.44□□□□□ -1.22
CPNE3-207ENST00000523588 SAMD11Q96NU1 681 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 UIMC1Q96RL1 719 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 PLA2G12BQ9BX93 195 aa7.44□□□□□ -1.22
CPNE3-207ENST00000523588 C14orf93Q9H972 538 aaKnown RBP7.44□□□□□ -1.22
CPNE3-207ENST00000523588 K7ESM1 405 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 MTNR1BP49286 362 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 NRG3P56975 720 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 SRSF2Q01130 221 aaKnown RBP7.43□□□□□ -1.22
CPNE3-207ENST00000523588 ITKQ08881 620 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 RIN1Q13671 783 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 MUM1Q2TAK8 710 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 SYDE2Q5VT97 1194 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 LMBR1LQ6UX01 489 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 TAS1R1Q7RTX1 841 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 GLB1L2Q8IW92 636 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 GIMAP8Q8ND71 665 aaPredicted RBP7.43□□□□□ -1.22
CPNE3-207ENST00000523588 AUTS2Q8WXX7 1259 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 CD248Q9HCU0 757 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 ING3Q9NXR8 418 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 TRHDEQ9UKU6 1024 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 ZFR2Q9UPR6 939 aaKnown RBP7.43□□□□□ -1.22
CPNE3-207ENST00000523588 WASHC2AQ641Q2 1341 aa7.43□□□□□ -1.22
CPNE3-207ENST00000523588 TRIM75PA6NK02 468 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 MTSS1O43312 755 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 TMEM127O75204 238 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 RAD17O75943 681 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 JUNP05412 331 aaKnown RBP7.42□□□□□ -1.22
CPNE3-207ENST00000523588 IARSP41252 1262 aaKnown RBP7.42□□□□□ -1.22
CPNE3-207ENST00000523588 CDK17Q00537 523 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 FUKQ8N0W3 1084 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 MSL3Q8N5Y2 521 aaKnown RBP7.42□□□□□ -1.22
CPNE3-207ENST00000523588 WWC2-AS2Q96NR7 200 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 NELFAQ9H3P2 528 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 DNAJC28Q9NX36 388 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 SLC30A1Q9Y6M5 507 aa7.42□□□□□ -1.22
CPNE3-207ENST00000523588 GABRDO14764 452 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 ALDH1A2O94788 518 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 MTHFD2P13995 350 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 NCLP19338 710 aaKnown RBP7.41□□□□□ -1.22
CPNE3-207ENST00000523588 RPS19P39019 145 aaKnown RBP7.41□□□□□ -1.22
CPNE3-207ENST00000523588 EFEMP1Q12805 493 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 UBE3CQ15386 1083 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 TTC9BQ8N6N2 239 aa7.41□□□□□ -1.22
CPNE3-207ENST00000523588 C1orf162Q8NEQ5 155 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms