RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SKAP1Q86WV1 359 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 TMEM87AQ8NBN3 555 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 CCDC148Q8NFR7 591 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 RDM1Q8NG50 284 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 SH2D3AQ9BRG2 576 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 RNF26Q9BY78 433 aaPredicted RBP25.58■■□□□ 1.69
PVT1-218ENST00000523328 CYP26B1Q9NR63 512 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 FAM105AQ9NUU6 356 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 VPS54Q9P1Q0 977 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 DNAJB4Q9UDY4 337 aa25.58■■□□□ 1.69
PVT1-218ENST00000523328 PIN4Q9Y237 131 aaKnown RBP25.58■■□□□ 1.69
PVT1-218ENST00000523328 B4GALT3O60512 393 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 ZNF623O75123 536 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 OFD1O75665 1012 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 SKIP12755 728 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 CLCN5P51795 746 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 PTPN14Q15678 1187 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 GLB1LQ6UWU2 654 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 MIER3Q7Z3K6 550 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 CABP7Q86V35 215 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 ZNF410Q86VK4 478 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 MFSD1Q9H3U5 465 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 INPP5FQ9Y2H2 1132 aa25.57■■□□□ 1.68
PVT1-218ENST00000523328 SLC11A1P49279 550 aa25.56■■□□□ 1.68
PVT1-218ENST00000523328 AKAP17AQ02040 695 aaKnown RBP25.56■■□□□ 1.68
PVT1-218ENST00000523328 CWF19L1Q69YN2 538 aaKnown RBP25.56■■□□□ 1.68
PVT1-218ENST00000523328 GPR149Q86SP6 731 aa25.56■■□□□ 1.68
PVT1-218ENST00000523328 KCNB2Q92953 911 aa25.56■■□□□ 1.68
PVT1-218ENST00000523328 INO80BQ9C086 356 aaPredicted RBP25.56■■□□□ 1.68
PVT1-218ENST00000523328 MAFO75444 373 aaPredicted RBP25.55■■□□□ 1.68
PVT1-218ENST00000523328 DNM2P50570 870 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 RAB27AP51159 221 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 Q4G0T1 1027 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 PPFIBP1Q86W92 1011 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 ZNF280BQ86YH2 543 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 RHPN2Q8IUC4 686 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 FBXL16Q8N461 479 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 TBCKQ8TEA7 893 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 SLC26A6Q9BXS9 759 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 AGXT2Q9BYV1 514 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 GBP3Q9H0R5 595 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 SFXN1Q9H9B4 322 aa25.55■■□□□ 1.68
PVT1-218ENST00000523328 SUCLA2Q9P2R7 463 aaPredicted RBP25.55■■□□□ 1.68
PVT1-218ENST00000523328 IFNAR1P17181 557 aa25.54■■□□□ 1.68
PVT1-218ENST00000523328 RNASELQ05823 741 aaKnown RBP25.54■■□□□ 1.68
PVT1-218ENST00000523328 KSR1Q8IVT5 923 aa25.54■■□□□ 1.68
PVT1-218ENST00000523328 JAKMIP1Q96N16 626 aaKnown RBP25.54■■□□□ 1.68
PVT1-218ENST00000523328 CLCN4P51793 760 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 AGMOQ6ZNB7 445 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 CCDC149Q6ZUS6 474 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 CATSPER4Q7RTX7 472 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 FRMD5Q7Z6J6 570 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 ACSF2Q96CM8 615 aaPredicted RBP25.53■■□□□ 1.68
PVT1-218ENST00000523328 KLHL5Q96PQ7 755 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 IFT122Q9HBG6 1241 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 SH3GLB2Q9NR46 395 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 GVINP1Q7Z2Y8 2422 aa25.53■■□□□ 1.68
PVT1-218ENST00000523328 DCHS1Q96JQ0 3298 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 CYP3A7-CYP3A51PA0A087WV96 503 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 LILRB3O75022 631 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 DDHD2O94830 711 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 TDP2O95551 362 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 CNPP09543 421 aaKnown RBP25.52■■□□□ 1.68
PVT1-218ENST00000523328 NPR3P17342 541 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 CYP3A7P24462 503 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 FOXK2Q01167 660 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 BLOC1S2Q6QNY1 142 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 ANO5Q75V66 913 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 OTOP3Q7RTS5 596 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 FLCNQ8NFG4 579 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 NLRP4Q96MN2 994 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 AGPAT5Q9NUQ2 364 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 PCDHB2Q9Y5E7 798 aa25.52■■□□□ 1.68
PVT1-218ENST00000523328 DDX11L8A8MPP1 907 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 PI15O43692 258 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 CDC45O75419 566 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 AOC1P19801 751 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 AFF1P51825 1210 aaKnown RBP25.51■■□□□ 1.67
PVT1-218ENST00000523328 NLRP5P59047 1200 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 TDGQ13569 410 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 ETNPPLQ8TBG4 499 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 NKD2Q969F2 451 aaPredicted RBP25.51■■□□□ 1.67
PVT1-218ENST00000523328 PGBD4Q96DM1 585 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 MBOAT7Q96N66 472 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 DUSP12Q9UNI6 340 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 SNX14Q9Y5W7 946 aa25.51■■□□□ 1.67
PVT1-218ENST00000523328 KLRC2P26717 231 aa25.5■■□□□ 1.67
PVT1-218ENST00000523328 C15orf39Q6ZRI6 1047 aa25.5■■□□□ 1.67
PVT1-218ENST00000523328 MRPL10Q7Z7H8 261 aaKnown RBP25.5■■□□□ 1.67
PVT1-218ENST00000523328 EMILIN2Q9BXX0 1053 aa25.5■■□□□ 1.67
PVT1-218ENST00000523328 C22orf23Q9BZE7 217 aa25.5■■□□□ 1.67
PVT1-218ENST00000523328 KCNK12Q9HB15 430 aa25.5■■□□□ 1.67
PVT1-218ENST00000523328 NCOA5Q9HCD5 579 aaKnown RBP25.5■■□□□ 1.67
PVT1-218ENST00000523328 STK39Q9UEW8 545 aa25.5■■□□□ 1.67
PVT1-218ENST00000523328 M0R2N6 131 aa25.49■■□□□ 1.67
PVT1-218ENST00000523328 SSBP05455 408 aaKnown RBP eCLIP25.49■■□□□ 1.67
PVT1-218ENST00000523328 RPS6KB1P23443 525 aa25.49■■□□□ 1.67
PVT1-218ENST00000523328 HSPA4P34932 840 aa25.49■■□□□ 1.67
PVT1-218ENST00000523328 LETM2Q2VYF4 491 aa25.49■■□□□ 1.67
PVT1-218ENST00000523328 PLA2G4FQ68DD2 849 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms