RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 LTBRP36941 435 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 NDUFV1P49821 464 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
PVT1-216ENST00000523068 ADAM15Q13444 863 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 TFDP1Q14186 410 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 RABEP1Q15276 862 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 CLLU1OSQ5K130 101 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 KCNT2Q6UVM3 1135 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 LRRC55Q6ZSA7 311 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 EFHBQ8N7U6 833 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 RNF149Q8NC42 400 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 ERMNQ8TAM6 284 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 HELQQ8TDG4 1101 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
PVT1-216ENST00000523068 PGBD4Q96DM1 585 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 ZNF558Q96NG5 402 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 CDCA3Q99618 268 aaPredicted RBP12.14□□□□□ -0.47
PVT1-216ENST00000523068 C1QTNF1Q9BXJ1 281 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 BMP2KQ9NSY1 1161 aaPredicted RBP12.14□□□□□ -0.47
PVT1-216ENST00000523068 AGPAT5Q9NUQ2 364 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 FAM105AQ9NUU6 356 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 PRKAG3Q9UGI9 489 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 NOL7Q9UMY1 257 aaKnown RBP12.14□□□□□ -0.47
PVT1-216ENST00000523068 KIF3AQ9Y496 699 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 POTEMA6NI47 508 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 ZBTB39O15060 712 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 ZNF623O75123 536 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 ERLIN2O94905 339 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 ATF7P17544 494 aaPredicted RBP12.13□□□□□ -0.47
PVT1-216ENST00000523068 GTF2F1P35269 517 aaKnown RBP eCLIP12.13□□□□□ -0.47
PVT1-216ENST00000523068 IRS1P35568 1242 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 NRIP1P48552 1158 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 ALDH7A1P49419 539 aaKnown RBP12.13□□□□□ -0.47
PVT1-216ENST00000523068 POU5F1BQ06416 359 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 BMS1Q14692 1282 aaKnown RBP12.13□□□□□ -0.47
PVT1-216ENST00000523068 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 GJD3Q8N144 294 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 TBC1D32Q96NH3 1257 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 TLE6Q9H808 572 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 TUFT1Q9NNX1 390 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 NGRNQ9NPE2 291 aaKnown RBP12.13□□□□□ -0.47
PVT1-216ENST00000523068 ENTPD7Q9NQZ7 604 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 SPG21Q9NZD8 308 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 HCSTQ9UBK5 93 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 CD207Q9UJ71 328 aa12.13□□□□□ -0.47
PVT1-216ENST00000523068 TDRD15B5MCY1 1934 aaKnown RBP12.13□□□□□ -0.47
PVT1-216ENST00000523068 BDP1A6H8Y1 2624 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 LINC01565O15544 149 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 TBX10O75333 385 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 OR52Z1P0C646 297 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 SRGAP2BP0DMP2 458 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 AXLP30530 894 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 SSTR3P32745 418 aaPredicted RBP12.12□□□□□ -0.47
PVT1-216ENST00000523068 TECP42680 631 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 RARRES1P49788 294 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 ERVFC1P60507 584 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
PVT1-216ENST00000523068 DLX2Q07687 328 aaPredicted RBP12.12□□□□□ -0.47
PVT1-216ENST00000523068 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
PVT1-216ENST00000523068 TTC38Q5R3I4 469 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 ADGRD2Q7Z7M1 963 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 RBM23Q86U06 439 aaKnown RBP12.12□□□□□ -0.47
PVT1-216ENST00000523068 CNNM3Q8NE01 707 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 URGCPQ8TCY9 931 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 POP1Q99575 1024 aaKnown RBP12.12□□□□□ -0.47
PVT1-216ENST00000523068 POLR3CQ9BUI4 534 aaPredicted RBP12.12□□□□□ -0.47
PVT1-216ENST00000523068 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 XPNPEP1Q9NQW7 623 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 PCDHB2Q9Y5E7 798 aa12.12□□□□□ -0.47
PVT1-216ENST00000523068 CNTNAP2Q9UHC6 1331 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 FSCN2O14926 492 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 MBTPS2O43462 519 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 MUTP22033 750 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 RPA1P27694 616 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 BCAR1P56945 870 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 PTENP60484 403 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 RNASELQ05823 741 aaKnown RBP12.11□□□□□ -0.47
PVT1-216ENST00000523068 ZNF174Q15697 407 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 SMAD2Q15796 467 aaKnown RBP12.11□□□□□ -0.47
PVT1-216ENST00000523068 CLUL1Q15846 466 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 NOMO2Q5JPE7 1267 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 PLPP4Q5VZY2 271 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 HAUS3Q68CZ6 603 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 NOTUMQ6P988 496 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 CATSPER3Q86XQ3 398 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
PVT1-216ENST00000523068 ADHFE1Q8IWW8 467 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 MCPH1Q8NEM0 835 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 PIGOQ8TEQ8 1089 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 LPPQ93052 612 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 NACC1Q96RE7 527 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 TCF25Q9BQ70 676 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 NFKBIZQ9BYH8 718 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms