RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 DENND4AQ7Z401 1863 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 MAFO75444 373 aaPredicted RBP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 PDGFBP01127 241 aaPredicted RBP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 SRGAP2CP0DJJ0 459 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 VCPP55072 806 aaKnown RBP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 TMEM184AQ6ZMB5 413 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 FAM43BQ6ZT52 329 aaPredicted RBP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 PIK3AP1Q6ZUJ8 805 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 SUGP1Q8IWZ8 645 aaKnown RBP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 TMEM87AQ8NBN3 555 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 CASP10Q92851 521 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 MRPL9Q9BYD2 267 aaKnown RBP17.29■□□□□ 0.36
MRPS28-209ENST00000522987 SMOC2Q9H3U7 446 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 FAM105AQ9NUU6 356 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 TBC1D13Q9NVG8 400 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 VAV3Q9UKW4 847 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 PIEZO1Q92508 2521 aa17.29■□□□□ 0.36
MRPS28-209ENST00000522987 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 ZBTB39O15060 712 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 MARCH6O60337 910 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 CCNT1O60563 726 aaKnown RBP17.28■□□□□ 0.36
MRPS28-209ENST00000522987 EPCAMP16422 314 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 SLC11A1P49279 550 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 AFF1P51825 1210 aaKnown RBP17.28■□□□□ 0.36
MRPS28-209ENST00000522987 POLGP54098 1239 aaPredicted RBP17.28■□□□□ 0.36
MRPS28-209ENST00000522987 PTPN21Q16825 1174 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 NOMO2Q5JPE7 1267 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 EARS2Q5JPH6 523 aaKnown RBP17.28■□□□□ 0.36
MRPS28-209ENST00000522987 GLB1LQ6UWU2 654 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 ZNF280BQ86YH2 543 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 CEP170P1Q96L14 293 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 MINDY3Q9H8M7 445 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 CYP26B1Q9NR63 512 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 CHST12Q9NRB3 414 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 COL4A3BPQ9Y5P4 624 aa17.28■□□□□ 0.36
MRPS28-209ENST00000522987 C2CD4DB7Z1M9 353 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 OFD1O75665 1012 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 MYBP10242 640 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 QARSP47897 775 aaKnown RBP17.27■□□□□ 0.36
MRPS28-209ENST00000522987 CYP4A11Q02928 519 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 SIGLEC14Q08ET2 396 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 CTTNQ14247 550 aaKnown RBP17.27■□□□□ 0.36
MRPS28-209ENST00000522987 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 CES5AQ6NT32 575 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 MOXD1Q6UVY6 613 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 NEK8Q86SG6 692 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 FBXL6Q8N531 539 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 PRPF31Q8WWY3 499 aaKnown RBP17.27■□□□□ 0.36
MRPS28-209ENST00000522987 DYDC2Q96IM9 177 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 VN1R3Q9BXE9 311 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 INO80BQ9C086 356 aaPredicted RBP17.27■□□□□ 0.36
MRPS28-209ENST00000522987 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 IFT122Q9HBG6 1241 aa17.27■□□□□ 0.36
MRPS28-209ENST00000522987 ASGR2P07307 311 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 GALTP07902 379 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 HOXB8P17481 243 aaPredicted RBP17.26■□□□□ 0.35
MRPS28-209ENST00000522987 PPP2R5CQ13362 524 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 BMP8AQ7Z5Y6 402 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 SLC7A3Q8WY07 619 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 HAS1Q92839 578 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 ASIC4Q96FT7 647 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 IGSF21Q96ID5 467 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 LXNQ9BS40 222 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 TM6SF1Q9BZW5 370 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 KCNMB3Q9NPA1 279 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 TPCN1Q9ULQ1 816 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 PCDHB2Q9Y5E7 798 aa17.26■□□□□ 0.35
MRPS28-209ENST00000522987 SPDYE4A6NLX3 237 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 DDHD2O94830 711 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 POMCP01189 267 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 CDC42EP1Q00587 391 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 NR5A1Q13285 461 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 XKR9Q5GH70 373 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 GALNT17Q6IS24 598 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 TMC5Q6UXY8 1006 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 AGMOQ6ZNB7 445 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 KREMEN2Q8NCW0 462 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 KCNH6Q9H252 994 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 ADAM7Q9H2U9 754 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 AGPAT5Q9NUQ2 364 aa17.25■□□□□ 0.35
MRPS28-209ENST00000522987 A0A087WWV3 80 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 C2CD2LO14523 706 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 CTDNEP1O95476 244 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 P4HBP07237 508 aaKnown RBP17.24■□□□□ 0.35
MRPS28-209ENST00000522987 SKIP12755 728 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 BMS1Q14692 1282 aaKnown RBP17.24■□□□□ 0.35
MRPS28-209ENST00000522987 EMC2Q15006 297 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
MRPS28-209ENST00000522987 DDX53Q86TM3 631 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms