RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	NT5C3A	Q9H0P0	336 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CSRNP2	Q9H175	543 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	RC3H2	Q9HBD1	1191 aa	Known RBP	9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	AGPAT5	Q9NUQ2	364 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TMEM161A	Q9NX61	479 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	DACT1	Q9NYF0	836 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CHD7	Q9P2D1	2997 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	INPP5F	Q9Y2H2	1132 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	ATG2A	Q2TAZ0	1938 aa		9.27	□□□□□ -0.93
CTNNA1-231	ENST00000521941	EYS	Q5T1H1	3165 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CHD9	Q3L8U1	2897 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PLXNA4	Q9HCM2	1894 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	B4GALT5	O43286	388 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TSPAN1	O60635	241 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	HIP1R	O75146	1068 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	F13A1	P00488	732 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	ZSCAN22	P10073	491 aa	Predicted RBP	9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	ATF7	P17544	494 aa	Predicted RBP	9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CYP11B2	P19099	503 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PLCG1	P19174	1290 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	LONP1	P36776	959 aa	Known RBP	9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PTEN	P60484	403 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CACNB1	Q02641	598 aa	Predicted RBP	9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	MBTD1	Q05BQ5	628 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	GPM6B	Q13491	265 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PTPA	Q15257	358 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TMEM119	Q4V9L6	283 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CMTR2	Q8IYT2	770 aa	Known RBP	9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	DEPTOR	Q8TB45	409 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	HELQ	Q8TDG4	1101 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	IFT74	Q96LB3	600 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	AK8	Q96MA6	479 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	SAMD11	Q96NU1	681 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	APOL6	Q9BWW8	343 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	FAM105A	Q9NUU6	356 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	RNF216	Q9NWF9	866 aa	Predicted RBP	9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TFIP11	Q9UBB9	837 aa	Known RBP	9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	COL6A3	P12111	3177 aa		9.26	□□□□□ -0.93
CTNNA1-231	ENST00000521941	NPHP3-ACAD11	A0A0J9YXS1	232 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941		A0A0U1RQF3	1178 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CCDC169	A6NNP5	214 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	MEIS3P2	A8K0S8	358 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	SFI1	A8K8P3	1242 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	HOXA2	O43364	376 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	NPTXR	O95502	500 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PRKCB	P05771	671 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PLA2G4B	P0C869	781 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TXLNA	P40222	546 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PBX3	P40426	434 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	RAB27A	P51159	221 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PEX3	P56589	373 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	MCM6	Q14566	821 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PPP2R5A	Q15172	486 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CLLU1OS	Q5K130	101 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	HYI	Q5T013	277 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	RINT1	Q6NUQ1	792 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	USP49	Q70CQ1	688 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	GPBP1	Q86WP2	473 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	SYMPK	Q92797	1274 aa	Known RBP	9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	KIFAP3	Q92845	792 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	EPSTI1	Q96J88	318 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	ZNF396	Q96N95	335 aa	Predicted RBP	9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	EIF2A	Q9BY44	585 aa	Known RBP	9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TRIM6	Q9C030	488 aa	Predicted RBP	9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TMEM117	Q9H0C3	514 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	GBP3	Q9H0R5	595 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	ELAC1	Q9H777	363 aa	Known RBP	9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PRDM6	Q9NQX0	595 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CHST12	Q9NRB3	414 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	RNF19A	Q9NV58	838 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	FBXO2	Q9UK22	296 aa	Predicted RBP	9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	USP20	Q9Y2K6	914 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	MTCH2	Q9Y6C9	303 aa		9.25	□□□□□ -0.93
CTNNA1-231	ENST00000521941	PRRC2B	Q5JSZ5	2229 aa	Known RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	LPXN	O60711	386 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	KRT18	P05783	430 aa	Known RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	LINC00271	P0C7V0	271 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	ARF4	P18085	180 aa	Predicted RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	NCL	P19338	710 aa	Known RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	HOXA11	P31270	313 aa	Predicted RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	BMPR1A	P36894	532 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	NAMPT	P43490	491 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	SLC12A3	P55017	1021 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	FAM189B	P81408	668 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	NCBP1	Q09161	790 aa	Known RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	DMP1	Q13316	513 aa	Predicted RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	BECN1	Q14457	450 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	MAPK6	Q16659	721 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	AMHR2	Q16671	573 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	TPRN	Q4KMQ1	711 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CDCA2	Q69YH5	1023 aa	Predicted RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	NOTUM	Q6P988	496 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	IFNLR1	Q8IU57	520 aa	Predicted RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	THNSL1	Q8IYQ7	743 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	CRIPAK	Q8N1N5	446 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	LRRC43	Q8N309	656 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	KRI1	Q8N9T8	703 aa	Known RBP	9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	LRRC15	Q8TF66	581 aa		9.24	□□□□□ -0.93
CTNNA1-231	ENST00000521941	DRC1	Q96MC2	740 aa		9.24	□□□□□ -0.93

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