RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 GNAT1P11488 350 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 CDC25BP30305 580 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 MCM7P33993 719 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 TECP42680 631 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 GRIN1Q05586 938 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 FAM26DQ5JW98 314 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 UBALD2Q8IYN6 164 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 CMTR2Q8IYT2 770 aaKnown RBP12.09□□□□□ -0.47
MRPS28-208ENST00000521605 IGSF22Q8N9C0 903 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 FLCNQ8NFG4 579 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 TBCKQ8TEA7 893 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
MRPS28-208ENST00000521605 MTMR9Q96QG7 549 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 RAB34Q9BZG1 259 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 DNAJC25Q9H1X3 360 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 PCDHA1Q9Y5I3 950 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
MRPS28-208ENST00000521605 KMT2BQ9UMN6 2715 aaPredicted RBP12.09□□□□□ -0.47
MRPS28-208ENST00000521605 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 VWA3AA6NCI4 1184 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 TBX3O15119 743 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 ASGR2P07307 311 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 SRGAP2BP0DMP2 458 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 ATP2B1P20020 1258 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 TPM4P67936 248 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 DHX8Q14562 1220 aaKnown RBP12.08□□□□□ -0.48
MRPS28-208ENST00000521605 IL17AQ16552 155 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 DUSP6Q16828 381 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 SPOUT1Q5T280 376 aaKnown RBP12.08□□□□□ -0.48
MRPS28-208ENST00000521605 UTP14CQ5TAP6 766 aaKnown RBP12.08□□□□□ -0.48
MRPS28-208ENST00000521605 RUFY4Q6ZNE9 571 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 RASGRP4Q8TDF6 673 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 LMBR1Q8WVP7 490 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 LINC01599Q8WXQ3 324 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 HINFPQ9BQA5 517 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 S1PR5Q9H228 398 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
MRPS28-208ENST00000521605 CCDC39Q9UFE4 941 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 NR2E1Q9Y466 385 aa12.08□□□□□ -0.48
MRPS28-208ENST00000521605 NCOR2Q9Y618 2525 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 BECN2A8MW95 431 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 C2CD4DB7Z1M9 353 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 CCNT1O60563 726 aaKnown RBP12.07□□□□□ -0.48
MRPS28-208ENST00000521605 ADCY5O95622 1261 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 CYP3A4P08684 503 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 ARP10275 920 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 ERCC5P28715 1186 aaPredicted RBP12.07□□□□□ -0.48
MRPS28-208ENST00000521605 CIITAP33076 1130 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 MORC3Q14149 939 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 TPRNQ4KMQ1 711 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 ANKRD54Q6NXT1 300 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 PDXDC2PQ6P474 469 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 PLA2G4DQ86XP0 818 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 DHX40Q8IX18 779 aaKnown RBP12.07□□□□□ -0.48
MRPS28-208ENST00000521605 IL31RAQ8NI17 732 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 SMARCE1Q969G3 411 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 MRFAP1L1Q96HT8 127 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 EPSTI1Q96J88 318 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 PDCD2LQ9BRP1 358 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 EHMT1Q9H9B1 1298 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 DISC1Q9NRI5 854 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 RMND1Q9NWS8 449 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 SERTAD1Q9UHV2 236 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 MRPL11Q9Y3B7 192 aaKnown RBP12.07□□□□□ -0.48
MRPS28-208ENST00000521605 PCDHA5Q9Y5H7 936 aa12.07□□□□□ -0.48
MRPS28-208ENST00000521605 GOLGA6L6A8MZA4 724 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 MEIS2O14770 477 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 HOXA13P31271 388 aaPredicted RBP12.06□□□□□ -0.48
MRPS28-208ENST00000521605 CD52P31358 61 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 SREBF1P36956 1147 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 UBA7P41226 1012 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 CLCN5P51795 746 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 ERVFC1P60507 584 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 SP4Q02446 784 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 DPYDQ12882 1025 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 PUM1Q14671 1186 aaKnown RBP eCLIP12.06□□□□□ -0.48
MRPS28-208ENST00000521605 ANGPT1Q15389 498 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 TMEM266Q2M3C6 531 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 Q4G0T1 1027 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 FBXO47Q5MNV8 452 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 JAKMIP3Q5VZ66 844 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 PLPP4Q5VZY2 271 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 CNNM4Q6P4Q7 775 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 SYCE2Q6PIF2 218 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 C11orf57Q6ZUT1 292 aaPredicted RBP12.06□□□□□ -0.48
MRPS28-208ENST00000521605 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 LUZP1Q86V48 1076 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 PAGE5Q96GU1 130 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 TMEM60Q9H2L4 133 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 AGO3Q9H9G7 860 aaKnown RBP12.06□□□□□ -0.48
MRPS28-208ENST00000521605 TELO2Q9Y4R8 837 aa12.06□□□□□ -0.48
MRPS28-208ENST00000521605 FRYLO94915 3013 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms