RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 TRIM61Q5EBN2 209 aa4.47□□□□□ -1.69
PCM1-214ENST00000521338 METTL24Q5JXM2 366 aa4.47□□□□□ -1.69
PCM1-214ENST00000521338 FBXO42Q6P3S6 717 aa4.47□□□□□ -1.69
PCM1-214ENST00000521338 LILRA3Q8N6C8 439 aaPredicted RBP4.47□□□□□ -1.69
PCM1-214ENST00000521338 ARL8AQ96BM9 186 aa4.47□□□□□ -1.69
PCM1-214ENST00000521338 SLC46A2Q9BY10 475 aa4.47□□□□□ -1.69
PCM1-214ENST00000521338 CPEB1Q9BZB8 566 aaKnown RBP4.47□□□□□ -1.69
PCM1-214ENST00000521338 WDR11Q9BZH6 1224 aa4.47□□□□□ -1.69
PCM1-214ENST00000521338 POLR3BQ9NW08 1133 aaPredicted RBP4.47□□□□□ -1.69
PCM1-214ENST00000521338 PFDN2Q9UHV9 154 aa4.47□□□□□ -1.69
PCM1-214ENST00000521338 RECQL4O94761 1208 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 CFBP00751 764 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 CDK4P11802 303 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 MECP2P51608 486 aaKnown RBP4.46□□□□□ -1.7
PCM1-214ENST00000521338 NPEPPSP55786 919 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 FOXI1Q12951 378 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 LONRF2Q1L5Z9 754 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 TMEM177Q53S58 311 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 PRR16Q569H4 304 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 SLFN12LQ6IEE8 588 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 CCDC62Q6P9F0 684 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 ARHGEF19Q8IW93 802 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 OR52N2Q8NGI0 321 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 LINC00476Q8WZB0 136 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 E2F7Q96AV8 911 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 IPO9Q96P70 1041 aaKnown RBP4.46□□□□□ -1.7
PCM1-214ENST00000521338 C14orf93Q9H972 538 aaKnown RBP4.46□□□□□ -1.7
PCM1-214ENST00000521338 ANKFY1Q9P2R3 1169 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 NCDNQ9UBB6 729 aa4.46□□□□□ -1.7
PCM1-214ENST00000521338 DAPK3O43293 454 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 EFCAB14O75071 495 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 GYPEP15421 78 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 PTH2RP49190 550 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 MYBPC3Q14896 1274 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 MTERF2Q49AM1 385 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 C2orf69Q8N8R5 385 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 MAGEB10Q96LZ2 347 aaPredicted RBP4.45□□□□□ -1.7
PCM1-214ENST00000521338 PDCD2LQ9BRP1 358 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 SOX7Q9BT81 388 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 NDC1Q9BTX1 674 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 BOCQ9BWV1 1114 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 CCDC113Q9H0I3 377 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 NDOR1Q9UHB4 597 aa4.45□□□□□ -1.7
PCM1-214ENST00000521338 COL3A1P02461 1466 aaPredicted RBP4.44□□□□□ -1.7
PCM1-214ENST00000521338 TCRBV16S1A1N1A0A5B0 115 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 UBA6A0AVT1 1052 aaPredicted RBP4.44□□□□□ -1.7
PCM1-214ENST00000521338 KCNQ2O43526 872 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 NPTXRO95502 500 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 USP14P54578 494 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 VPS72Q15906 364 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 BRAPQ7Z569 592 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 IGSF22Q8N9C0 903 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 SIMC1Q8NDZ2 872 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 COQ10AQ96MF6 247 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 LSM14BQ9BX40 385 aaKnown RBP4.44□□□□□ -1.7
PCM1-214ENST00000521338 OSBPL6Q9BZF3 934 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 PITHD1Q9GZP4 211 aaPredicted RBP4.44□□□□□ -1.7
PCM1-214ENST00000521338 SFMBT1Q9UHJ3 866 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.44□□□□□ -1.7
PCM1-214ENST00000521338 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 SPATA31A6Q5VVP1 1343 aa4.44□□□□□ -1.7
PCM1-214ENST00000521338 A0A0A6YYJ9 748 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 APOBEC3AP31941 199 aaPredicted RBP4.43□□□□□ -1.7
PCM1-214ENST00000521338 KIF11P52732 1056 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 SEC24CP53992 1094 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 TTC38Q5R3I4 469 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 IQSEC1Q6DN90 963 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 KANSL1Q7Z3B3 1105 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 SUPT20HQ8NEM7 779 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 PPP1R14CQ8TAE6 165 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 CPPED1Q9BRF8 314 aaPredicted RBP4.43□□□□□ -1.7
PCM1-214ENST00000521338 ING3Q9NXR8 418 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 EIF2B4Q9UI10 523 aaKnown RBP4.43□□□□□ -1.7
PCM1-214ENST00000521338 FRMD4BQ9Y2L6 1034 aa4.43□□□□□ -1.7
PCM1-214ENST00000521338 NCR1O76036 304 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 GAAP10253 952 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 BCAR1P56945 870 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 BEAN1Q3B7T3 259 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
PCM1-214ENST00000521338 FGD2Q7Z6J4 655 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 LRFN3Q9BTN0 628 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 TRIM55Q9BYV6 548 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 AKIP1Q9NQ31 210 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 INSL6Q9Y581 213 aa4.42□□□□□ -1.7
PCM1-214ENST00000521338 GAGE12BA1L429 117 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 PIPSLA2A3N6 862 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 GAGE12HA6NDE8 117 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 LEFTY2O00292 366 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 RNASET2O00584 256 aaKnown RBP4.41□□□□□ -1.7
PCM1-214ENST00000521338 DNAJC6O75061 913 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 TCF3P15923 654 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 BMPR1AP36894 532 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 FOXF2Q12947 444 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 ARHGAP44Q17R89 818 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 EPHA10Q5JZY3 1008 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 PRAMEF9Q5VWM5 478 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 GPRIN1Q7Z2K8 1008 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 GDF7Q7Z4P5 450 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 FAM83AQ86UY5 434 aa4.41□□□□□ -1.7
PCM1-214ENST00000521338 CMTR2Q8IYT2 770 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms