RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 BSNDQ8WZ55 320 aa22.89■■□□□ 1.25
TRIM35-203ENST00000521253 TMEM117Q9H0C3 514 aa22.89■■□□□ 1.25
TRIM35-203ENST00000521253 ZSCAN16Q9H4T2 348 aaPredicted RBP22.89■■□□□ 1.25
TRIM35-203ENST00000521253 LMCD1Q9NZU5 365 aa22.89■■□□□ 1.25
TRIM35-203ENST00000521253 COL4A4P53420 1690 aaPredicted RBP22.89■■□□□ 1.25
TRIM35-203ENST00000521253 LRRIQ4A6NIV6 560 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 TSPAN1O60635 241 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 ERLIN2O94905 339 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 EOMESO95936 686 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 RB1P06400 928 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 PCBP1Q15365 356 aaKnown RBP eCLIP22.88■■□□□ 1.25
TRIM35-203ENST00000521253 CABP7Q86V35 215 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 SLC17A8Q8NDX2 589 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 CASD1Q96PB1 797 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 PLIN2Q99541 437 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 POLD4Q9HCU8 107 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 FAM105AQ9NUU6 356 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 HCSTQ9UBK5 93 aa22.88■■□□□ 1.25
TRIM35-203ENST00000521253 SKIP12755 728 aa22.87■■□□□ 1.25
TRIM35-203ENST00000521253 CEBPZQ03701 1054 aaKnown RBP22.87■■□□□ 1.25
TRIM35-203ENST00000521253 AMHR2Q16671 573 aa22.87■■□□□ 1.25
TRIM35-203ENST00000521253 CLLU1OSQ5K130 101 aa22.87■■□□□ 1.25
TRIM35-203ENST00000521253 CDCA2Q69YH5 1023 aaPredicted RBP22.87■■□□□ 1.25
TRIM35-203ENST00000521253 SPRYD3Q8NCJ5 442 aa22.87■■□□□ 1.25
TRIM35-203ENST00000521253 CDK5RAP3Q96JB5 506 aa22.87■■□□□ 1.25
TRIM35-203ENST00000521253 C11orf84Q9BUA3 381 aaPredicted RBP22.87■■□□□ 1.25
TRIM35-203ENST00000521253 PLVAPQ9BX97 442 aa22.87■■□□□ 1.25
TRIM35-203ENST00000521253 NT5C3AQ9H0P0 336 aa22.87■■□□□ 1.25
TRIM35-203ENST00000521253 ZNF623O75123 536 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 MARCKSP29966 332 aaPredicted RBP22.86■■□□□ 1.25
TRIM35-203ENST00000521253 LONP1P36776 959 aaKnown RBP22.86■■□□□ 1.25
TRIM35-203ENST00000521253 UBA7P41226 1012 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 RAB27AP51159 221 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 LONRF3Q496Y0 759 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 TMEM119Q4V9L6 283 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 UBXN11Q5T124 520 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 ABI1Q8IZP0 508 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 KCTD17Q8N5Z5 321 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 LPPQ93052 612 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 USP28Q96RU2 1077 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 RUSC1Q9BVN2 902 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 TYW1Q9NV66 732 aaKnown RBP22.86■■□□□ 1.25
TRIM35-203ENST00000521253 PCDHB2Q9Y5E7 798 aa22.86■■□□□ 1.25
TRIM35-203ENST00000521253 AXLP30530 894 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 RINT1Q6NUQ1 792 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 LRRC55Q6ZSA7 311 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.85■■□□□ 1.25
TRIM35-203ENST00000521253 ZBTB8OSQ8IWT0 167 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 HELQQ8TDG4 1101 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 KIFAP3Q92845 792 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 MRPL38Q96DV4 380 aaKnown RBP22.85■■□□□ 1.25
TRIM35-203ENST00000521253 CPB2Q96IY4 423 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 CWH43Q9H720 699 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 PRDM6Q9NQX0 595 aa22.85■■□□□ 1.25
TRIM35-203ENST00000521253 SPTBN5Q9NRC6 3674 aaKnown RBP22.85■■□□□ 1.25
TRIM35-203ENST00000521253 XIRP2A4UGR9 3374 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 MEIS3P2A8K0S8 358 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 GRM6O15303 877 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 B4GALT5O43286 388 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 SLC26A4O43511 780 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 ARF4P18085 180 aaPredicted RBP22.84■■□□□ 1.25
TRIM35-203ENST00000521253 NAMPTP43490 491 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 NCBP1Q09161 790 aaKnown RBP22.84■■□□□ 1.25
TRIM35-203ENST00000521253 PPP2R5AQ15172 486 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 PTPROQ16827 1216 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 SPOUT1Q5T280 376 aaKnown RBP22.84■■□□□ 1.25
TRIM35-203ENST00000521253 NOTUMQ6P988 496 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 C1orf186Q6ZWK4 172 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 LRRC43Q8N309 656 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 P2RX5Q93086 422 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 C2orf40Q9H1Z8 148 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 FBXO2Q9UK22 296 aaPredicted RBP22.84■■□□□ 1.25
TRIM35-203ENST00000521253 PLAGL2Q9UPG8 496 aa22.84■■□□□ 1.25
TRIM35-203ENST00000521253 RALGAPA2Q2PPJ7 1873 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 HIP1RO75146 1068 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 SSBP05455 408 aaKnown RBP eCLIP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 PLA2G4BP0C869 781 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 SLC12A3P55017 1021 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 NAALADL2Q58DX5 795 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 FOXD4L5Q5VV16 416 aaPredicted RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 PPP4R3CPQ6ZMV5 832 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 MRPL10Q7Z7H8 261 aaKnown RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 DAW1Q8N136 415 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 SYT2Q8N9I0 419 aaPredicted RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 KLHL23Q8NBE8 558 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 DEPTORQ8TB45 409 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 FOXD4L4Q8WXT5 416 aaPredicted RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 PGBD4Q96DM1 585 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 CCDC51Q96ER9 411 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 CALML4Q96GE6 196 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 IFT74Q96LB3 600 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 KIFC3Q9BVG8 833 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 EIF2AQ9BY44 585 aaKnown RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 CSRNP2Q9H175 543 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 FZD8Q9H461 694 aa22.83■■□□□ 1.25
TRIM35-203ENST00000521253 ALG13Q9NP73 1137 aaKnown RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 PRMT7Q9NVM4 692 aaPredicted RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 SRPRBQ9Y5M8 271 aaKnown RBP22.83■■□□□ 1.25
TRIM35-203ENST00000521253 FNDC1Q4ZHG4 1894 aaPredicted RBP22.83■■□□□ 1.24
TRIM35-203ENST00000521253 NLRC5Q86WI3 1866 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms