RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 RBP3P10745 1247 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 SLC5A3P53794 718 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 ATP2C1P98194 919 aaPredicted RBP6.87□□□□□ -1.31
SKP1-208ENST00000521216 ZNF827Q17R98 1081 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 CCDC178Q5BJE1 867 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 PLA2G15Q8NCC3 412 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 TSPEARQ8WU66 669 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 OSBPL6Q9BZF3 934 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 SPEF1Q9Y4P9 236 aa6.87□□□□□ -1.31
SKP1-208ENST00000521216 ARHGAP6O43182 974 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PCDHGA12O60330 932 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PRAMEF4O60810 478 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 LY86O95711 162 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 MTNR1BP49286 362 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 NEK2P51955 445 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 RAC3P60763 192 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PPP2CBP62714 309 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PPP2CAP67775 309 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 TCIRG1Q13488 830 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 TTF1Q15361 905 aaPredicted RBP6.86□□□□□ -1.31
SKP1-208ENST00000521216 UBXN11Q5T124 520 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 KRT40Q6A162 431 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 CHMP4CQ96CF2 233 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 RPL10LQ96L21 214 aaKnown RBP6.86□□□□□ -1.31
SKP1-208ENST00000521216 LRRC37BQ96QE4 947 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 XYLT2Q9H1B5 865 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PUF60Q9UHX1 559 aaKnown RBP6.86□□□□□ -1.31
SKP1-208ENST00000521216 G3BP2Q9UN86 482 aaKnown RBP6.86□□□□□ -1.31
SKP1-208ENST00000521216 CTDP1Q9Y5B0 961 aaPredicted RBP6.86□□□□□ -1.31
SKP1-208ENST00000521216 PCDHGA9Q9Y5G4 932 aaKnown RBP6.86□□□□□ -1.31
SKP1-208ENST00000521216 PCDHGA8Q9Y5G5 932 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PCDHGA7Q9Y5G6 932 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PCDHGA6Q9Y5G7 932 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PCDHGA3Q9Y5H0 932 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 PCDHGA2Q9Y5H1 932 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 SLC4A7Q9Y6M7 1214 aa6.86□□□□□ -1.31
SKP1-208ENST00000521216 SEC24DO94855 1032 aaPredicted RBP6.85□□□□□ -1.31
SKP1-208ENST00000521216 GAAP10253 952 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 AGXTP21549 392 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 BPIFB4P59827 614 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 EFCAB2Q5VUJ9 269 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 MBNL2Q5VZF2 373 aaKnown RBP6.85□□□□□ -1.31
SKP1-208ENST00000521216 CLEC14AQ86T13 490 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 ANKRD53Q8N9V6 530 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 PIK3C3Q8NEB9 887 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 JADE3Q92613 823 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 FATE1Q969F0 183 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 SLC7A6OSQ96CW6 309 aaPredicted RBP6.85□□□□□ -1.31
SKP1-208ENST00000521216 NCDNQ9UBB6 729 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 DNM3Q9UQ16 869 aa6.85□□□□□ -1.31
SKP1-208ENST00000521216 LUC7L2Q9Y383 392 aaKnown RBP6.85□□□□□ -1.31
SKP1-208ENST00000521216 TOX4O94842 621 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 CNOT4O95628 575 aaKnown RBP6.84□□□□□ -1.31
SKP1-208ENST00000521216 INHBBP09529 407 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 ODF1Q14990 250 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 SURF1Q15526 300 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 FRMD5Q7Z6J6 570 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 GLB1L3Q8NCI6 653 aaPredicted RBP6.84□□□□□ -1.31
SKP1-208ENST00000521216 LPPQ93052 612 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 HOOK2Q96ED9 719 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 LMF1Q96S06 567 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 PTPN18Q99952 460 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 C14orf93Q9H972 538 aaKnown RBP6.84□□□□□ -1.31
SKP1-208ENST00000521216 ING3Q9NXR8 418 aa6.84□□□□□ -1.31
SKP1-208ENST00000521216 FZD9O00144 591 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 LAMTOR5O43504 91 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 CDC14BO60729 498 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 ALDH1A2O94788 518 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 CT47B1P0C2W7 299 aaPredicted RBP6.83□□□□□ -1.32
SKP1-208ENST00000521216 GSPT1P15170 499 aaKnown RBP6.83□□□□□ -1.32
SKP1-208ENST00000521216 ADRM1Q16186 407 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 MUM1L1Q5H9M0 696 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 BTNL9Q6UXG8 535 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 UNC5BQ8IZJ1 945 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 JDP2Q8WYK2 163 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 NEIL1Q96FI4 390 aaPredicted RBP6.83□□□□□ -1.32
SKP1-208ENST00000521216 TEKT5Q96M29 485 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 ADI1Q9BV57 179 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 SLC13A1Q9BZW2 595 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 SLC6A15Q9H2J7 730 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 DMRT3Q9NQL9 472 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 IP6K2Q9UHH9 426 aa6.83□□□□□ -1.32
SKP1-208ENST00000521216 A0A1W2PR48 441 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 NPEPPSL1A6NEC2 478 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 PRICKLE3O43900 615 aaPredicted RBP6.82□□□□□ -1.32
SKP1-208ENST00000521216 AKR1B10O60218 316 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 NDUFS2O75306 463 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 ADSLP30566 484 aaPredicted RBP6.82□□□□□ -1.32
SKP1-208ENST00000521216 KIR2DL3P43628 341 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 RECQLP46063 649 aaPredicted RBP6.82□□□□□ -1.32
SKP1-208ENST00000521216 ADCY7P51828 1080 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 HGFACQ04756 655 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 NFYCQ13952 458 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 NOMO1Q15155 1222 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 UBE3CQ15386 1083 aa6.82□□□□□ -1.32
SKP1-208ENST00000521216 ABHD15Q6UXT9 468 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms