RNA–Protein interactions for RNA: ENST00000520495.5

MTCL1-209, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 2

Gene MTCL1, Length 3,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-209ENST00000520495 ARMCX3Q9UH62 379 aaPredicted RBP16.7■□□□□ 0.26
MTCL1-209ENST00000520495 LRCH1Q9Y2L9 728 aa16.7■□□□□ 0.26
MTCL1-209ENST00000520495 SMAPO00193 183 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 DDX3XO00571 662 aaKnown RBP eCLIP16.69■□□□□ 0.26
MTCL1-209ENST00000520495 PLCG2P16885 1265 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 COASYQ13057 564 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 NONOQ15233 471 aaKnown RBP eCLIP16.69■□□□□ 0.26
MTCL1-209ENST00000520495 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 RUNDC3BQ96NL0 473 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 PFASO15067 1338 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 EPHB2P29323 1055 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 IL6STP40189 918 aaPredicted RBP16.69■□□□□ 0.26
MTCL1-209ENST00000520495 RCN2Q14257 317 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 CCDC25Q86WR0 208 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 SH3TC2Q8TF17 1288 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 MAGEB18Q96M61 343 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 SERPINB12Q96P63 405 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 PITPNM3Q9BZ71 974 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 DCLRE1BQ9H816 532 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.69■□□□□ 0.265e-6■■■■□ 22
MTCL1-209ENST00000520495 TFCP2L1Q9NZI6 479 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 SIGLEC16A6NMB1 481 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 PODXLO00592 558 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 EYA4O95677 639 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 ANXA13P27216 316 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 HHATQ5VTY9 493 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 KRT25Q7Z3Z0 450 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 NEK8Q86SG6 692 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 MARCH10Q8NA82 808 aaPredicted RBP16.69■□□□□ 0.26
MTCL1-209ENST00000520495 FGFBP2Q9BYJ0 223 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 USP20Q9Y2K6 914 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 ATP8B3O60423 1300 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
MTCL1-209ENST00000520495 TSPY2A6NKD2 308 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 BRAFP15056 766 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 POLGP54098 1239 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-209ENST00000520495 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 SLC7A6OSQ96CW6 309 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-209ENST00000520495 PCDHA3Q9Y5H8 950 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 PHF2O75151 1096 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 COQ9O75208 318 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 ATP5DP30049 168 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 VHLP40337 213 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 CACNA2D1P54289 1103 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 SESN3P58005 492 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 FAM26FQ5R3K3 315 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 TNS2Q63HR2 1409 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 INTS5Q6P9B9 1019 aaKnown RBP16.68■□□□□ 0.26
MTCL1-209ENST00000520495 LRRC8CQ8TDW0 803 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 FBXO41Q8TF61 875 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 LRRC37BQ96QE4 947 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 LRRC27Q9C0I9 530 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 DMAP1Q9NPF5 467 aaPredicted RBP16.68■□□□□ 0.26
MTCL1-209ENST00000520495 STOML1Q9UBI4 398 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 CHKBQ9Y259 395 aa16.68■□□□□ 0.26
MTCL1-209ENST00000520495 PDLIM1O00151 329 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 CREB3O43889 395 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 TAC1P20366 129 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 CHRNA3P32297 505 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 ATP8A2Q9NTI2 1148 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 DLEC1Q9Y238 1755 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 CYTH3O43739 400 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 ATP9AO75110 1047 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 ACSL3O95573 720 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 LMNAP02545 664 aaKnown RBP16.67■□□□□ 0.26
MTCL1-209ENST00000520495 T-ENOLP0DO92 83 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 SKIP12755 728 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 PON1P27169 355 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 PPATQ06203 517 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 AADACL2Q6P093 401 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 FAM47EQ6ZV65 393 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 PNMA1Q8ND90 353 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 ALG3Q92685 438 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 DNAJC19Q96DA6 116 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 CCDC88AQ3V6T2 1871 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 KCNA3P22001 575 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 YARSP54577 528 aaKnown RBP16.67■□□□□ 0.26
MTCL1-209ENST00000520495 TRMT10CQ7L0Y3 403 aaKnown RBP16.67■□□□□ 0.26
MTCL1-209ENST00000520495 PRELID2Q8N945 189 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 ART4Q93070 314 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 PCYOX1Q9UHG3 505 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 MAD2L2Q9UI95 211 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 HDAC9Q9UKV0 1011 aa16.67■□□□□ 0.26
MTCL1-209ENST00000520495 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
MTCL1-209ENST00000520495 LGR5O75473 907 aa16.66■□□□□ 0.26
MTCL1-209ENST00000520495 IMPDH2P12268 514 aa16.66■□□□□ 0.26
MTCL1-209ENST00000520495 VCAM1P19320 739 aa16.66■□□□□ 0.26
MTCL1-209ENST00000520495 KLRK1P26718 216 aa16.66■□□□□ 0.26
MTCL1-209ENST00000520495 RXRBP28702 533 aa16.66■□□□□ 0.26
MTCL1-209ENST00000520495 GSTT1P30711 240 aa16.66■□□□□ 0.26
MTCL1-209ENST00000520495 FOXN2P32314 431 aa16.66■□□□□ 0.26
MTCL1-209ENST00000520495 CLUL1Q15846 466 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms