RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TCIRG1Q13488 830 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 RNF219Q5W0B1 726 aaPredicted RBP5.49□□□□□ -1.53
SQLE-204ENST00000520493 KRT40Q6A162 431 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 MAMDC4Q6UXC1 1216 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 GPR135Q8IZ08 494 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 BCL6BQ8N143 479 aaPredicted RBP5.49□□□□□ -1.53
SQLE-204ENST00000520493 EFHBQ8N7U6 833 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 TMEM176AQ96HP8 235 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 MPHOSPH9Q99550 1183 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 MTFR1LQ9H019 292 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 CSRNP2Q9H175 543 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 TLR9Q9NR96 1032 aa5.49□□□□□ -1.53
SQLE-204ENST00000520493 PHLDB1Q86UU1 1377 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 ST20-MTHFSA0A0A6YYL1 179 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 F2P00734 622 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 ATP2A2P16615 1042 aaKnown RBP5.48□□□□□ -1.53
SQLE-204ENST00000520493 ACRV1P26436 265 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 ADCY7P51828 1080 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 KPNA1P52294 538 aaPredicted RBP5.48□□□□□ -1.53
SQLE-204ENST00000520493 BPIFB4P59827 614 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 MAN2A1Q16706 1144 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 GAGE13Q4V321 117 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
SQLE-204ENST00000520493 C1orf210Q8IVY1 113 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 THEMISQ8N1K5 641 aaPredicted RBP5.48□□□□□ -1.53
SQLE-204ENST00000520493 ANKRD35Q8N283 1001 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 ZNF808Q8N4W9 903 aaPredicted RBP5.48□□□□□ -1.53
SQLE-204ENST00000520493 LEO1Q8WVC0 666 aaPredicted RBP5.48□□□□□ -1.53
SQLE-204ENST00000520493 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.48□□□□□ -1.53
SQLE-204ENST00000520493 RCAN3Q9UKA8 241 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 GIT1Q9Y2X7 761 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 WASHC2CQ9Y4E1 1318 aa5.48□□□□□ -1.53
SQLE-204ENST00000520493 PRPF6O94906 941 aaKnown RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 PARNO95453 639 aaKnown RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 SCNN1BP51168 640 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 CRHR2Q13324 411 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 FOXE3Q13461 319 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 MYBPC3Q14896 1274 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 BRDTQ58F21 947 aaPredicted RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 KIAA1841Q6NSI8 718 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 Q6ZSN1 163 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 ANKRD53Q8N9V6 530 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 OR2W6PQ8NHA6 318 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 RTF1Q92541 710 aaKnown RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 HIST1H2AHQ96KK5 128 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 RPL10LQ96L21 214 aaKnown RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 HIST1H2AJQ99878 128 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 MYL10Q9BUA6 226 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 FAM126AQ9BYI3 521 aaPredicted RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 MTG2Q9H4K7 406 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 C14orf93Q9H972 538 aaKnown RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 THG1LQ9NWX6 298 aaKnown RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 USP36Q9P275 1121 aaKnown RBP5.47□□□□□ -1.53
SQLE-204ENST00000520493 DNAI1Q9UI46 699 aa5.47□□□□□ -1.53
SQLE-204ENST00000520493 BPIP17213 487 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 EPHB1P54762 984 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 ANTXR2P58335 489 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 FAPQ12884 760 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 LRRC32Q14392 662 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 PCBP1Q15365 356 aaKnown RBP eCLIP5.46□□□□□ -1.54
SQLE-204ENST00000520493 HSP90AB2PQ58FF8 381 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 MIIPQ5JXC2 388 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 ODR4Q5SWX8 454 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 CREB3L3Q68CJ9 461 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 C11orf74Q86VG3 221 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 NXPE1Q8N323 547 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 UBR7Q8N806 425 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 PLA2G15Q8NCC3 412 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 WDR66Q8TBY9 1149 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 CHTF18Q8WVB6 975 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 EXTL1Q92935 676 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 NKD2Q969F2 451 aaPredicted RBP5.46□□□□□ -1.54
SQLE-204ENST00000520493 FERMT2Q96AC1 680 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 CHFRQ96EP1 664 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 TTC1Q99614 292 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 NOL10Q9BSC4 688 aaKnown RBP5.46□□□□□ -1.54
SQLE-204ENST00000520493 PITHD1Q9GZP4 211 aaPredicted RBP5.46□□□□□ -1.54
SQLE-204ENST00000520493 PUS7LQ9H0K6 701 aaKnown RBP5.46□□□□□ -1.54
SQLE-204ENST00000520493 POFUT1Q9H488 388 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 IFT22Q9H7X7 185 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 GEMIN8Q9NWZ8 242 aaKnown RBP5.46□□□□□ -1.54
SQLE-204ENST00000520493 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
SQLE-204ENST00000520493 C2orf78A6NCI8 922 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 ZNF891A8MT65 544 aaPredicted RBP5.45□□□□□ -1.54
SQLE-204ENST00000520493 GPR39O43194 453 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 FSBPO95073 299 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 JUNP05412 331 aaKnown RBP5.45□□□□□ -1.54
SQLE-204ENST00000520493 VSIG10L2P0DP72 767 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 LMO1P25800 156 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 GUCY2FP51841 1108 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 DSG1Q02413 1049 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 PTH1RQ03431 593 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 ESPNLQ6ZVH7 1005 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 GAREM2Q75VX8 874 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 KANSL1Q7Z3B3 1105 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 STRA8Q7Z7C7 330 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 CLEC14AQ86T13 490 aa5.45□□□□□ -1.54
SQLE-204ENST00000520493 SPATS2Q86XZ4 545 aaKnown RBP5.45□□□□□ -1.54
SQLE-204ENST00000520493 USP7Q93009 1102 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms