RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 STILQ15468 1287 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 KIAA0753Q2KHM9 967 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 OLFML2BQ68BL8 750 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 DPF2Q92785 391 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 HDAC10Q969S8 669 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 TNIP3Q96KP6 325 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 TMEM209Q96SK2 561 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
LSM1-202ENST00000520286 B3GNT5Q9BYG0 378 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 KLHL11Q9NVR0 708 aa9.28□□□□□ -0.92
LSM1-202ENST00000520286 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSM1-202ENST00000520286 CREB3O43889 395 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 C8BP07358 591 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 NCAM1P13591 858 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 HTR1BP28222 390 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 GJA9P57773 515 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 KANK2Q63ZY3 851 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 MIGA2Q7L4E1 593 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 IRF2BP1Q8IU81 584 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 GLB1L2Q8IW92 636 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 KIAA0319LQ8IZA0 1049 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 OR5AN1Q8NGI8 311 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 RIN2Q8WYP3 895 aaPredicted RBP9.27□□□□□ -0.93
LSM1-202ENST00000520286 GJA10Q969M2 543 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 TACO1Q9BSH4 297 aaKnown RBP9.27□□□□□ -0.93
LSM1-202ENST00000520286 LRFN3Q9BTN0 628 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 SYNPO2Q9UMS6 1093 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 PCDHGB6Q9Y5F9 930 aa9.27□□□□□ -0.93
LSM1-202ENST00000520286 MAFO75444 373 aaPredicted RBP9.26□□□□□ -0.93
LSM1-202ENST00000520286 IL18BPO95998 194 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 SERPINB3P29508 390 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 AK2P54819 239 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 CD83Q01151 205 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 IL10RAQ13651 578 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 DGKDQ16760 1214 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 PHF19Q5T6S3 580 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 DARS2Q6PI48 645 aaKnown RBP9.26□□□□□ -0.93
LSM1-202ENST00000520286 LMBR1LQ6UX01 489 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 NPNTQ6UXI9 565 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 ZNF526Q8TF50 670 aaPredicted RBP9.26□□□□□ -0.93
LSM1-202ENST00000520286 CGRRF1Q99675 332 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 FDXACB1Q9BRP7 624 aaPredicted RBP9.26□□□□□ -0.93
LSM1-202ENST00000520286 PUF60Q9UHX1 559 aaKnown RBP9.26□□□□□ -0.93
LSM1-202ENST00000520286 ZFP69BQ9UJL9 534 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 L1RE1Q9UN81 338 aa9.26□□□□□ -0.93
LSM1-202ENST00000520286 CFAP20Q9Y6A4 193 aaKnown RBP9.26□□□□□ -0.93
LSM1-202ENST00000520286 PQBP1O60828 265 aaKnown RBP9.25□□□□□ -0.93
LSM1-202ENST00000520286 SEC24DO94855 1032 aaPredicted RBP9.25□□□□□ -0.93
LSM1-202ENST00000520286 SLC5A1P13866 664 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 FBLN1P23142 703 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 VIPR1P32241 457 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 PPP3CAQ08209 521 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 MGAT5Q09328 741 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 MAP3K12Q12852 859 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 SEMA5AQ13591 1074 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 DHX8Q14562 1220 aaKnown RBP9.25□□□□□ -0.93
LSM1-202ENST00000520286 DPP8Q6V1X1 898 aaPredicted RBP9.25□□□□□ -0.93
LSM1-202ENST00000520286 KAT5Q92993 513 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 PAWRQ96IZ0 340 aaKnown RBP9.25□□□□□ -0.93
LSM1-202ENST00000520286 KMT5AQ9NQR1 393 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 RBM12Q9NTZ6 932 aaKnown RBP9.25□□□□□ -0.93
LSM1-202ENST00000520286 MAGEL2Q9UJ55 1249 aa9.25□□□□□ -0.93
LSM1-202ENST00000520286 A0A0A6YYK5 440 aaPredicted RBP9.24□□□□□ -0.93
LSM1-202ENST00000520286 HRKO00198 91 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 CYP2C8P10632 490 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 AGFG1P52594 562 aaKnown RBP9.24□□□□□ -0.93
LSM1-202ENST00000520286 MGAT2Q10469 447 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 NOMO1Q15155 1222 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 ANO6Q4KMQ2 910 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 RNF220Q5VTB9 566 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 TOGARAM2Q6ZUX3 1019 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 CXXC5Q7LFL8 322 aaKnown RBP9.24□□□□□ -0.93
LSM1-202ENST00000520286 STPG3Q8N7X2 389 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 DYDC2Q96IM9 177 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 MYD88Q99836 296 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 SOX7Q9BT81 388 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 HAPLN2Q9GZV7 340 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 BHMT2Q9H2M3 363 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 NLRC4Q9NPP4 1024 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 STXBP5LQ9Y2K9 1186 aa9.24□□□□□ -0.93
LSM1-202ENST00000520286 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
LSM1-202ENST00000520286 CAPN8A6NHC0 703 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 GOLIM4O00461 696 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 MC3RP41968 323 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 IL12RB1P42701 662 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 CACNB3P54284 484 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 ANTXR2P58335 489 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 DSC2Q02487 901 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 LONRF1Q17RB8 773 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 PPP4R3AQ6IN85 833 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 FAM180AQ6UWF9 173 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 DAAM2Q86T65 1068 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 SRLQ86TD4 932 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 FAM186BQ8IYM0 893 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 ABI1Q8IZP0 508 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 OR2I1PQ8NGU4 316 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 SYT3Q9BQG1 590 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 PCDHA13Q9Y5I0 950 aa9.23□□□□□ -0.93
LSM1-202ENST00000520286 FAM171A2A8MVW0 826 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms