RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 CHAMP1Q96JM3 812 aa6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 NLRP4Q96MN2 994 aa6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 MRPL9Q9BYD2 267 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 NFKBIZQ9BYH8 718 aa6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 CCSER1Q9C0I3 900 aa6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 BHMT2Q9H2M3 363 aa6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 KCNF1Q9H3M0 494 aa6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 PRMT7Q9NVM4 692 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 KIAA1024Q9UPX6 916 aa6.22□□□□□ -1.41
CTNNA1-220ENST00000520260 KAT6AQ92794 2004 aa6.21□□□□□ -1.41
CTNNA1-220ENST00000520260 MYH9P35579 1960 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 LRRIQ4A6NIV6 560 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 N4BP3O15049 544 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 USO1O60763 962 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 SLITRK3O94933 977 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 CXCL10P02778 98 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 CSF2RAP15509 400 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 ATP2A2P16615 1042 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 CYP11B2P19099 503 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 GUCY2CP25092 1073 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 CYP2C18P33260 490 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 PPP1R2P41236 205 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 NLRP11P59045 1033 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 CEBPZQ03701 1054 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 NFX1Q12986 1120 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 DCAF4L1Q3SXM0 396 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 LRIT3Q3SXY7 679 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 HYIQ5T013 277 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF618Q5T7W0 954 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 NOTUMQ6P988 496 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 ELMSAN1Q6PJG2 1045 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 USP37Q86T82 979 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 LINC00301Q8NCQ3 95 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 URGCPQ8TCY9 931 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 HERVK_113Q902F9 699 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 TSC1Q92574 1164 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 LARP4BQ92615 738 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 HVCN1Q96D96 273 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF830Q96NB3 372 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 YME1L1Q96TA2 773 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 GDF15Q99988 308 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 TNMDQ9H2S6 317 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 DHX33Q9H6R0 707 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 SLC28A3Q9HAS3 691 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 PARVGQ9HBI0 331 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 TOPORSQ9NS56 1045 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 RMND1Q9NWS8 449 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM53CQ9NYF3 392 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 KANSL3Q9P2N6 904 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 PYCARDQ9ULZ3 195 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 INSL6Q9Y581 213 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 PAXBP1Q9Y5B6 917 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 PCDHB7Q9Y5E2 793 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 CDY2AQ9Y6F7 541 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 PDE4DIPQ5VU43 2346 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 GRIN2DO15399 1336 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 CNTNAP2Q9UHC6 1331 aa6.21□□□□□ -1.42
CTNNA1-220ENST00000520260 ZMYM2Q9UBW7 1377 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 IGKV6-21A0A0C4DH24 114 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 A0A1W2PQ27 194 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 A0A1W2PQ64 194 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 A0A1W2PQD8 194 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ARHGEF37A1IGU5 675 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TRIM43BA6NCK2 446 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 CCDC169A6NNP5 214 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 INO80B-WBP1J3KQ70 363 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 EML1O00423 815 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 XPOTO43592 962 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TLL1O43897 1013 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 LPXNO60711 386 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 KINO60870 393 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 SMC2O95347 1197 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 EOMESO95936 686 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 SLFN14P0C7P3 912 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 PLA2G4BP0C869 781 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 CCDC192P0DO97 292 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 GHRP10912 638 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 DARSP14868 501 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 PPM1AP35813 382 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 MATR3P43243 847 aaKnown RBP eCLIP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TOB1P50616 345 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 GPC3P51654 580 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 YARSP54577 528 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ADAM17P78536 824 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 SLC20A2Q08357 652 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 LAMTOR4Q0VGL1 99 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 STIM1Q13586 685 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TARBP2Q15633 366 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 KIZQ2M2Z5 673 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 PLEKHG4Q58EX7 1191 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 EARS2Q5JPH6 523 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 FBXO47Q5MNV8 452 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF697Q5TEC3 545 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 FOXD4L5Q5VV16 416 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF787Q6DD87 383 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ADALQ6DHV7 355 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TWF2Q6IBS0 349 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 GLB1LQ6UWU2 654 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 SLC24A5Q71RS6 500 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms