RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CCT2P78371 535 aaKnown RBP6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 PPP4R3AQ6IN85 833 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 CBLL1Q75N03 491 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 MIGA2Q7L4E1 593 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 B3GNT8Q7Z7M8 397 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 KIAA0319LQ8IZA0 1049 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 GLB1L3Q8NCI6 653 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 ELAC2Q9BQ52 826 aaKnown RBP6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 KCND1Q9NSA2 647 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 RBM12Q9NTZ6 932 aaKnown RBP6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 ZFP69BQ9UJL9 534 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 FBXO10Q9UK96 956 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 FAM50BQ9Y247 325 aa6.71□□□□□ -1.34
HMGB1P46-201ENST00000520062 FAM171A2A8MVW0 826 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 IFRD1O00458 451 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 BIN1O00499 593 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 IL18BPO95998 194 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 MAN2A1Q16706 1144 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 THEMIS2Q5TEJ8 643 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 GRAMD4Q6IC98 578 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 ZSWIM9Q86XI8 627 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 SPICE1Q8N0Z3 855 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 PPP1R35Q8TAP8 253 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 GJA10Q969M2 543 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 DYDC2Q96IM9 177 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 CLIC6Q96NY7 704 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 FDXACB1Q9BRP7 624 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 OSBPL6Q9BZF3 934 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 KMT5AQ9NQR1 393 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 KLHL11Q9NVR0 708 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 POLR3BQ9NW08 1133 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 L1RE1Q9UN81 338 aa6.7□□□□□ -1.34
HMGB1P46-201ENST00000520062 A0A0A6YYK5 440 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 SLC16A6O15403 523 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 PEX10O60683 326 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 AGFG1P52594 562 aaKnown RBP6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 CACNB3P54284 484 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 ITGA1P56199 1179 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 CD83Q01151 205 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 PPP3CAQ08209 521 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 KCNMB1Q16558 191 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 C3orf36Q3SXR2 165 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 ANO6Q4KMQ2 910 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 TMEM200BQ69YZ2 307 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 TSHZ1Q6ZSZ6 1077 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 CCDC149Q6ZUS6 474 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 FAM156AQ8NDB6 213 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 TACO1Q9BSH4 297 aaKnown RBP6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 SOX7Q9BT81 388 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 INTUQ9ULD6 942 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 PHTF1Q9UMS5 762 aa6.69□□□□□ -1.34
HMGB1P46-201ENST00000520062 SGTAO43765 313 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 CYP7B1O75881 506 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 ALDH2P05091 517 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 MYBP10242 640 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 GSPT1P15170 499 aaKnown RBP6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 PFKLP17858 780 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 HTR1BP28222 390 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 GLRBP48167 497 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 GP2P55259 537 aaKnown RBP6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 ADAM9Q13443 819 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 SEMA5AQ13591 1074 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 DARS2Q6PI48 645 aaKnown RBP6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 TOGARAM2Q6ZUX3 1019 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 TTC7BQ86TV6 843 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 MORC1Q86VD1 984 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 GPR156Q8NFN8 814 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 SMARCC2Q8TAQ2 1214 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 IL17RAQ96F46 866 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 CGRRF1Q99675 332 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 PTPN18Q99952 460 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 B3GNT5Q9BYG0 378 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 SAE1Q9UBE0 346 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 STXBP5LQ9Y2K9 1186 aa6.68□□□□□ -1.34
HMGB1P46-201ENST00000520062 A0A1W2PR48 441 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 CAPN8A6NHC0 703 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 GOLIM4O00461 696 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 HYAL3O43820 417 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 PHF2O75151 1096 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 FSBPO95073 299 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 SLC5A1P13866 664 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 AK2P54819 239 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 SRSF3P84103 164 aaKnown RBP6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 MGAT5Q09328 741 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 LLGL1Q15334 1064 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 KIAA0753Q2KHM9 967 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 WDR72Q3MJ13 1102 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 NPNTQ6UXI9 565 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 LDHDQ86WU2 507 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 STPG3Q8N7X2 389 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 TTLL6Q8N841 843 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 NSUN6Q8TEA1 469 aaKnown RBP6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 C7orf25Q9BPX7 421 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 LRFN3Q9BTN0 628 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 DMRT3Q9NQL9 472 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 SIRT5Q9NXA8 310 aa6.67□□□□□ -1.34
HMGB1P46-201ENST00000520062 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms